Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0241 ATGTTGGGCAAAAGGCCACAACCACTGATCGGAAAAATCTCCGAACTTTTGGTGTCCGGTGGCCGCGCTGCCGCTCTTTTCGACGCCATCGGAAGCCCGAGAAGCCCATTTGAACATATGAACTTAAAGATGCAACAATCACCTAAAGGTCTAAAAAGTTACGACCTTGGTGGTGTTGGTCTGGGAATTGTGGTGGCTCTAGATAAATCCGAGGAACCAGGGCACGAAATTCTGCCCAAACACGCCGTTTGCACATCAAGTTTGAACAAATCGGTTAAACAAAGCGCGTTTCAAAAGGGTGTGACCGAAATTCCCGTCGGAAGCTCCGAGGACTACACATATGTCACATACCATATTTCCAACAAGACGATCACTAAGGTTTATTACGATGGCGGTGAAGGTGGAATCCTAACACATGGCTACTATAACATTAACAACAACACCAACAACGTCGGTGGTGTTAGAAGATTCCCTCAAACGCATAATTTAATTCAAGATGATGACGAACCGTCATATGCAACATCAGATTTTCTCAGCACATGTCACTTGTGCAGGAAGAATCTCCATGGCCAAGACATATACATGTACAGAGGGGAGAAGGCTTTTTGCAGCACCGAGTGCCGTTCAAGGCAAATATCCATGGATGAACGCAAAGAGAGGTGCAGATCAGAAGCTTCAAGATCTGTGGAATTGTCTAGTTCATCATCACACACAAGAGAACAAATGTTTTCAACTGGGATTGTGGCCCTTTAA 753 0.4515 MLGKRPQPLIGKISELLVSGGRAAALFDAIGSPRSPFEHMNLKMQQSPKGLKSYDLGGVGLGIVVALDKSEEPGHEILPKHAVCTSSLNKSVKQSAFQKGVTEIPVGSSEDYTYVTYHISNKTITKVYYDGGEGGILTHGYYNINNNTNNVGGVRRFPQTHNLIQDDDEPSYATSDFLSTCHLCRKNLHGQDIYMYRGEKAFCSTECRSRQISMDERKERCRSEASRSVELSSSSSHTREQMFSTGIVAL* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0241 250 PANTHER DUF581 FAMILY PROTEIN 1 250 - -
Vra5g0241 250 Pfam zinc-finger of the FCS-type, C2-C2 167 218 IPR007650 -
Vra5g0241 250 ProSiteProfiles Zinc finger FLZ-type profile. 176 219 IPR007650 -
Vra5g0241 250 PANTHER OS02G0174800 PROTEIN 1 250 IPR044604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0241 Vra-Chr5 2184181 2185649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0241 - - gmx:100813156 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2641 7 46635451 46636713 Vra5g0241 5 2184181 2185649 PCT