Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0231 ATGAGGACGTCGTCGTTCAGGAGATGCAGCAGCGGCGAGTTCCAATTGTCCGAGAGCTTCGGTACCTCGTCTCCGACGGTCGGAGGACGCGCCTACGGCGCAATGATGCCGGTGTTCCTCAACGACCTCCGGAGCAATCACCACAAGGAGCTCGTGGAGATCACGCTGGAACTCGAAAATGACGCGGTCCTTCTCTGCAACGTGACGCCGGCGGCCGCGTATTCCGCTCCCAATGCTTCTCCGTCGTCGAGCAGGGGAGGAGTTGACGACGGCGGCGTAGGCGGCGTGGCTCGGAGTCTCTCTATTACGTCGAGGATTCGGAGGAAGTTCCCGTGGCTTCGCTCGCTATCGTCAGCGTCGGTGGAGAGTGTCGCCGCCGCTGAAGATCCGGTGACGACGGCGCGAAACGCACGGAAAATGAGAGCGAAGCTTGAACGGACGAGGTCGAGTGCGCAGAGAGCTCTGAAAGGTCTGAGATTCATCAGCAAGTCCGGGGAGGCCAGCGAGGAGTTGTGGGGAAAGGTGCAAGAACGGTTCGGCTTGTTGGCCAAAGATGGCATGCTCGCTCGTGAAGACTTCGGTGAATGCATAGGCATGGAAGATTCGAAGGAATTTGCAGTGTGTATATTCGACGCATTGACTCGAAGGAAGGAAAGGAGAGTTAGTAGCATAAACAGAGAAGAGTTGCACGACTTCTGGTTGCAAATTTCAGACCAGAGTTTTGATGCTCGCCTGCAGATTTTCTTTGACATGGCAGACAGTAACGAGGACGGAAGAATTACTAGAGAGGAAGTACAAGAGCTCATAATGCTCAGTGCTTCCGCAAACAAGTTATCAAAGCTAAAGGAACAAGCTGAAGGATACGCTTCCTTAATAATGGAAGAATTAGACCCAGAAAACCTGGGTTATATCGAGCTGTGGCAGTTAGAAATGTTGTTACTAGAAAAGGATAGATACATGAACTACAGCAGACAACTAAGCAGTGCAAGCGTAAATTGGAGTCAAAATATGAACGAGAGAAGAACTAGAAATGAGATAGAAAGATTTCGCAGAACTGTCCAATGTCTTGCTTTAGAGTATTGGAGAAGGGGTTGGATTTTGTTATTGTGGTTGGTTACCGTTGCCAGCCTCTTTGGCTGGAAATATTACCAGTATAGAAACAGATCTACTTTCCAAGTCATGAGCTACTGCATACCCGTAGCCAAGGGTGCTGCAGAGACACTCAAGTTCAACATGGCTCTCATCCTCTTACCAGTTTGTCGAAACACTCTCACATGGCTTCGTTCCACCGGAGCCAGAAAGTTTGTGCCCTTCGATGACAACATTAATTTCCACAAGATGATTGCATTCGCCATAGCTGTTGCAGTCGCTGTTCATGCCGGCAGTCATCTGGCGTGTGACTTTCCCCTTCTCGTAAACTCATCTCCGGAAAAATTTTCAGTTATAGCTTCAGATTTCAATAACAAAAGACCCACATACAAATCACTTCTGACCGGAGTAGAAGGCGTAACTGGAATCTCAATGGTTGTTCTCATGGCCATCTCTTTCACCCTAGCAACTCACCACTTCCGGAGAAATGCAGTAAGGCTTCCTTCACCCTTTAACAGATTGACAGGCTTCAACGCATTTTGGTACTCGCACCACCTTTTTGCTCTGGTCTACGTTCTGCTACTCGTTCATGGAACATTCTTGTATTTGACCCATCGGTGGTACCAGAAAACGACATGGATGTATATCTCTGTTCCTCTGCTGCTGTACATAGCAGAGCGTACTCTACGCACTCGAAGATCAGCACATTATACGGTGAAAATTCTGAAGGTTTCGGGGCTACCAGGAAATGTCTTCAGCTTAATCATGTCTAAGCCCAATGGATTCAAGTACAAAAGCGGACAGTACATATTCTTACAATGTCCAAAAATCTCTCCCTTTGAGTGGCACCCTTTTTCCATCACCTCAGCTCCAGGAGATGAGTACCTAAGTGTTCACATCCGGACAGTGGGAGACTGGACCCAAGAACTAAAGCTTCTGCTAACAAAAGATGATGACAAATTGCCTTCGATTAAACGTGGTGCGACGTTTGGTGAACTAATGCAACTGGACCAAAGAGGACAACCGAGACTGCTCGTTGATGGCCCTTATGGAGCTCCAGCACAAGACTACCAAAGCTTTGATGTACTACTCCTCATAGGATTAGGAATTGGAGCAACTCCTTTCATTAGCATTCTCCGAGATCTTCTCAATAACACCAAAACGTTGGATGAACTCGGGGTGCAGGAACCATCAAACACAGAAACAAGTCAAACGACCAGATCAGATGAGAGCTCCAATAGTTTTACATCATCAAACTTAACGCCCTTAGGAAATAAGAAATCACGAAGGACTACTAATGCTTATTTCTACTGGGTTACTAGGGAGCCTGGATCTTTTGAATGGTTTAAAGGAGTAATGGACGAAGTTGCAGAAATGGATCACAAAGGTCAAATTGAGCTCCACAACTATCTTACAAGTGTCTATGAAGAGGGGGATGCAAGATCAACCTTAATCACCATGATCCAAGCACTGAACCATGCCAAACATGGTGTTGACATCCTATCAGGCACTCGAGTAAGAACACACTTTGCTAGGCCTAATTGGAAAGAGGTTTTCAACAAGATTGCCTCCAAACATCCGTTTTCTACAGTAGGAGTGTTCTATTGTGGGATGCCAGTATTGGCAAAGGAGCTAAAGAAGCTTTCACTTGAACTCAGCCACAAGACAACCACACGCTTCGAGTTTCACAAGGAGTACTTCTGA 2793 0.4708 MRTSSFRRCSSGEFQLSESFGTSSPTVGGRAYGAMMPVFLNDLRSNHHKELVEITLELENDAVLLCNVTPAAAYSAPNASPSSSRGGVDDGGVGGVARSLSITSRIRRKFPWLRSLSSASVESVAAAEDPVTTARNARKMRAKLERTRSSAQRALKGLRFISKSGEASEELWGKVQERFGLLAKDGMLAREDFGECIGMEDSKEFAVCIFDALTRRKERRVSSINREELHDFWLQISDQSFDARLQIFFDMADSNEDGRITREEVQELIMLSASANKLSKLKEQAEGYASLIMEELDPENLGYIELWQLEMLLLEKDRYMNYSRQLSSASVNWSQNMNERRTRNEIERFRRTVQCLALEYWRRGWILLLWLVTVASLFGWKYYQYRNRSTFQVMSYCIPVAKGAAETLKFNMALILLPVCRNTLTWLRSTGARKFVPFDDNINFHKMIAFAIAVAVAVHAGSHLACDFPLLVNSSPEKFSVIASDFNNKRPTYKSLLTGVEGVTGISMVVLMAISFTLATHHFRRNAVRLPSPFNRLTGFNAFWYSHHLFALVYVLLLVHGTFLYLTHRWYQKTTWMYISVPLLLYIAERTLRTRRSAHYTVKILKVSGLPGNVFSLIMSKPNGFKYKSGQYIFLQCPKISPFEWHPFSITSAPGDEYLSVHIRTVGDWTQELKLLLTKDDDKLPSIKRGATFGELMQLDQRGQPRLLVDGPYGAPAQDYQSFDVLLLIGLGIGATPFISILRDLLNNTKTLDELGVQEPSNTETSQTTRSDESSNSFTSSNLTPLGNKKSRRTTNAYFYWVTREPGSFEWFKGVMDEVAEMDHKGQIELHNYLTSVYEEGDARSTLITMIQALNHAKHGVDILSGTRVRTHFARPNWKEVFNKIASKHPFSTVGVFYCGMPVLAKELKKLSLELSHKTTTRFEFHKEYF* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0231 930 PANTHER RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN E 40 930 - -
Vra5g0231 930 SFLD NADPH oxidase subgroup (NOX) 137 930 - -
Vra5g0231 930 Gene3D - 714 930 IPR039261 -
Vra5g0231 930 Gene3D Translation factors 586 684 - -
Vra5g0231 930 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 597 719 IPR017927 GO:0016491
Vra5g0231 930 Pfam Ferric reductase like transmembrane component 403 558 IPR013130 -
Vra5g0231 930 Pfam Ferric reductase NAD binding domain 723 912 IPR013121 GO:0016491
Vra5g0231 930 Coils Coil 134 154 - -
Vra5g0231 930 MobiDBLite consensus disorder prediction 756 789 - -
Vra5g0231 930 SUPERFAMILY EF-hand 160 324 IPR011992 -
Vra5g0231 930 Pfam Respiratory burst NADPH oxidase 143 243 IPR013623 GO:0004601|GO:0050664
Vra5g0231 930 Gene3D - 144 261 - -
Vra5g0231 930 ProSiteProfiles EF-hand calcium-binding domain profile. 240 275 IPR002048 GO:0005509
Vra5g0231 930 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 722 930 IPR039261 -
Vra5g0231 930 PRINTS Cytochrome B-245 heavy chain signature 448 466 IPR000778 GO:0016020|GO:0016491
Vra5g0231 930 PRINTS Cytochrome B-245 heavy chain signature 540 560 IPR000778 GO:0016020|GO:0016491
Vra5g0231 930 PRINTS Cytochrome B-245 heavy chain signature 705 718 IPR000778 GO:0016020|GO:0016491
Vra5g0231 930 PRINTS Cytochrome B-245 heavy chain signature 728 745 IPR000778 GO:0016020|GO:0016491
Vra5g0231 930 CDD EFh 223 270 IPR002048 GO:0005509
Vra5g0231 930 Pfam FAD-binding domain 601 716 IPR013112 GO:0016491
Vra5g0231 930 ProSitePatterns EF-hand calcium-binding domain. 253 265 IPR018247 -
Vra5g0231 930 SUPERFAMILY Riboflavin synthase domain-like 600 716 IPR017938 -
Vra5g0231 930 CDD NOX_Duox_like_FAD_NADP 604 882 - -
Vra5g0231 930 PANTHER NADPH OXIDASE 40 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0231 Vra-Chr5 2034730 2043815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0231 23 930 Miscellaneous Gene Families AT1G19230 62.065 0.0 1169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0231 K13447 - gmx:100805697 1635.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0231 5 2034730 2043815 Vra5g0231 5 2034730 2043815 ECH