LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra5g0224	ATGACGGCGTCTAACAAGAGAAACTACAAGGAGAAACCAATTCGACGCAAAGAAGAAAAACCGGAAGAACCGGAAGTGCCAAAATACAGAGATCGAGCTAAGGAGCGAAGAGAAGATCAAAATCCTGATTATGAACAAACTGAACTTGGGTTTCATGCAGTTGCTCCACCTGGTACTGTGGATCTTCGGTCATCTGATGCGCACAAGTTATCTATTGAGAAGAGCAAGTACCTTGGAGGCGATGTGGAGCACACACATTTGGTCAAAGGTTTGGATTATGCTTTGCTGAACAAAGTAAGAAGTGAGATAGAGAAGAAACCAGATGCTGGGGATGATACTGATGGGAAATCCAGGTCAACAAAGGAAGATCAACAAGTGTCAATTCGTACAGCAACTGCTAAGTCAGTTTATCAGTGGATCGTCAAGCCTCAAACAATCAGTAAGACAAATGAGATGTTCCTCCCTGGTCGAATGACATTTATTTATAACATGGAGGGTGGATACCATCATGATATTCCAACAACCTTGCATCGTAGTAAAGCTGACTGTCCAGTGCCAGAGGAAATGGTTACAGTTAATGTTGATGGATCCGTTCTAGATCGAATTGCTAAAATAATGTCATATCTTCGTCTTGGTTCTTCTGGGAAGATCCTAAAGAAGAAAAAGAAGGAAAAAGATGCAAAAGGGAAGATTTTGGCCGTTGGTAATGGATATGACAAAGAGGATAAGCCATCAAAGGTTGAAAGTGGAGCAAAACATCAAGCTGAAAAAGAAATAATCCCACCTCCTCCGCCACCCATAAAGAAAAATCCTCTTCATTCAAGAGAGAAACAAGGCCCAGCTGTTGCTAGAGCAGAAGATGATGACATTTTTCTAGGTGATGGTATTGACTATGATGTACCTGGCAAGGACTTGAGCCAAACTCCTGTCTCCGAGGACATGGAAGAGTCTCCTAGGAACAAAGAAAAACCTTCATATTTCGAAGAACCTACTTATGGTCCCGTCCCACCTTCAATGCTTCCCCAAGGGTGGCAAGAAACTAATGGATACGATGTAATGCAAACACAAGCCTTGGCTGGCGGTTACCAAGGAGAGTGGCAAGAGTACCAGTATGCTGAACAACTGGCTTACCCAGATCAATATCTTCAACCAAATATGCAGGCCTATGATGTGCAAGGAGGTGTAAATCTTCCTCAAGATCCACGCTTTATGACACAAGAAGAGAAGGACCGAGGTTTGGGATCAGTGTTTAAGCGAGATGACCAGAGACTTCAACAGCTGAGGGAGAAAGATGCCCGTGAAAAAGATCCCAACTTCATTTCAGAGAGTTACTCTGAATGTTACCCAGGATATCAAGAATATAACCGTGAGATAGTGGACAGTGATGATGAAGACGACTTGTCCAAAATGGATATGGGTGGAAGGGCAAAGGGTCGCCTTCATAGATGGGACTTTGAAACTGAAGAGGAATGGGCAACTTACAATGAGCAGAAGGAAGCAATGCCAAAAGCTGCATTCCAGTTCGGTGTGAAGATGCAAGATGGTCGGAAGACCCGAAAGCAAAACAAGGACCAGAAGCTCAATAATGATTTGCACAAGATCAATAAGATACTTGCGAGAAAGAAGATGGAAAAGGACACAAATGGAGAGGGGGGCCACCATTATGATGATGAACCGACACCTGGAAAGAAGCTTCGAATATGA	1704	0.4331	MTASNKRNYKEKPIRRKEEKPEEPEVPKYRDRAKERREDQNPDYEQTELGFHAVAPPGTVDLRSSDAHKLSIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIEKKPDAGDDTDGKSRSTKEDQQVSIRTATAKSVYQWIVKPQTISKTNEMFLPGRMTFIYNMEGGYHHDIPTTLHRSKADCPVPEEMVTVNVDGSVLDRIAKIMSYLRLGSSGKILKKKKKEKDAKGKILAVGNGYDKEDKPSKVESGAKHQAEKEIIPPPPPPIKKNPLHSREKQGPAVARAEDDDIFLGDGIDYDVPGKDLSQTPVSEDMEESPRNKEKPSYFEEPTYGPVPPSMLPQGWQETNGYDVMQTQALAGGYQGEWQEYQYAEQLAYPDQYLQPNMQAYDVQGGVNLPQDPRFMTQEEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGYQEYNREIVDSDDEDDLSKMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLNNDLHKINKILARKKMEKDTNGEGGHHYDDEPTPGKKLRI*	568

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra5g0224	567	Pfam	RED-like protein C-terminal region	444	550	IPR012492	-
	Vra5g0224	567	MobiDBLite	consensus disorder prediction	104	126	-	-
	Vra5g0224	567	MobiDBLite	consensus disorder prediction	8	45	-	-
	Vra5g0224	567	MobiDBLite	consensus disorder prediction	1	62	-	-
	Vra5g0224	567	Pfam	RED-like protein N-terminal region	6	222	IPR012916	-
	Vra5g0224	567	PANTHER	RED PROTEIN IK FACTOR CYTOKINE IK	5	566	IPR039896	-
	Vra5g0224	567	MobiDBLite	consensus disorder prediction	104	123	-	-
	Vra5g0224	567	MobiDBLite	consensus disorder prediction	270	291	-	-
	Vra5g0224	567	MobiDBLite	consensus disorder prediction	235	255	-	-
	Vra5g0224	567	PANTHER	PROTEIN RED	5	566	-	-
	Vra5g0224	567	MobiDBLite	consensus disorder prediction	541	567	-	-
	Vra5g0224	567	MobiDBLite	consensus disorder prediction	235	345	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra5g0224	K13109		-	gmx:100775354	1044.26

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra5g0224	5	1947821	1952687	Vra5g0224	5	1947821	1952687	ECH