Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0219 ATGTCGCCGTCTTCCGCCGACCACGGCGGGGACCACCGCTGCTCCCGGCAAGAAATCAACGGCTTCTCCAATGACCACATCGAAATGGCCACTCCTTGTACGGCATCGTCGACGCTCGGCTACATAGTCGACGCCGTCCCTGCAAACGAGCGGGAGAAGCTCCGGAGAATCCTAGTCGCTTCAGCAAAGGGTTTCTCGATCGGCGCCGGCATCAAGGGCGGCCTCGCTATCTTCGCCATCTTGGCTCGGTTGACGCGGAAAAAGCCGCCAAGGAAGGGGATTGAGGTGACGAACAGCGATGCAATTGTCGAGGCTCTGAAGGAAACATTGAGATACGGTCTTTTCCTTGGAACCTTCGCCGGAACGTTCGTGTCCACCGACGAGGTTATCGGTGCTCTCGCTGGTCACCGTAGGACTGCGAAGTGGAGGGCTCTGGTAGCAGGGGCGGTGGCCGGGTCTTCGATGCTTCTTACAGGGTTAGAAGATCAGCACACTAGTTTGGCTATTTATATTCTCATGCGTGCTGCTGTCTTGGCGTCTCGTTGTGGGATTAAGAGCAAACGGTTTGGAAAAATTTGTAAGCCTCTCACGTGGAAGCACGGTGACATTTTCCTCATGTGTCTCTCCTCCTCACAGATATTGTCTGCTTATATATTAAAGCAAGATAGTTTACCAGCTTCATATAAATCCTTTCTCAATAAGCATGGTGGAAAGGATCCAGTTATCTTACAAGGTGTAAAAGATATAGCGAGTGGCAAGCCTTTCACTAATTTGGGTGCAATTGAGAAATACTACAAGACCATGGGTGTCGATGTGAAATTAAAACCAGATATGAAAGTCCCATGCTCGATTGTACATGGGAATCAAACATGCACTGGACATATCTTCACTTTTCTCCTTCAAGCTTACCAAAGAGCACTACCTGTTTATCTTCCAGTTTATTTGATACCTGCACTTATTGTTCATAGAAAAGGACTTTTAAAAAGGCCTAGCACAATATTAACCAAGAGTCTTTTGGGCACAGCAAGATCAAGCTTGTTTCTGTCTGTGTATTGCGCTTCTGCTTGGATGTGGACATGCTTTCTTTTCAGGATTTTCAAAAGATGTAACATTCCAATGGTGGCCATGGGAACTTTTCCAACTGGCCTTGCATTGGCCATTGAGAAGGAAAGCAGGCGAATGGAAATATCATTATACTGCCTTGCCCGGGCGATTGAGAGTTTCTTTACATGTGTAGCTGATGCAGGATATCTGCCACAATCAAGAAGGATCAAGAGGGCTGATGTGGTGGTTTTCAGCTTGTCAACAGCCATCATAATGCATTGTTATGCAGAGGAGAGGGAAGTGTTTAAATCCAAATACTTGAATGTCCTTGATTGGGTATTTGGGGTACCTCCTCCTCCATGTGAAACCCCGCGATGCAAAGATAGGTAG 1434 0.4742 MSPSSADHGGDHRCSRQEINGFSNDHIEMATPCTASSTLGYIVDAVPANEREKLRRILVASAKGFSIGAGIKGGLAIFAILARLTRKKPPRKGIEVTNSDAIVEALKETLRYGLFLGTFAGTFVSTDEVIGALAGHRRTAKWRALVAGAVAGSSMLLTGLEDQHTSLAIYILMRAAVLASRCGIKSKRFGKICKPLTWKHGDIFLMCLSSSQILSAYILKQDSLPASYKSFLNKHGGKDPVILQGVKDIASGKPFTNLGAIEKYYKTMGVDVKLKPDMKVPCSIVHGNQTCTGHIFTFLLQAYQRALPVYLPVYLIPALIVHRKGLLKRPSTILTKSLLGTARSSLFLSVYCASAWMWTCFLFRIFKRCNIPMVAMGTFPTGLALAIEKESRRMEISLYCLARAIESFFTCVADAGYLPQSRRIKRADVVVFSLSTAIIMHCYAEEREVFKSKYLNVLDWVFGVPPPPCETPRCKDR* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0219 477 Pfam N-terminal cysteine-rich region of Transmembrane protein 135 299 410 IPR031926 -
Vra5g0219 477 PANTHER BNAANNG02190D PROTEIN 30 469 - -
Vra5g0219 477 PANTHER UNCHARACTERIZED 30 469 IPR026749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0219 Vra-Chr5 1877516 1883420 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0219 - - gmx:100806036 842.032