Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0218 ATGGCTGCTACCAAATCCAATACCACCATCAACAATCTCTTCGACGATTCCCTCACCGAAATCTTCTGCAAACTCCCATGCAAATCCCTTTTCTCATGCAAGAGCGTTTCAAAGCATTGGCTCACACTCATTTCCAATACCAATTTCCATTCCCTATACCTCACTCATCAACACACCCTCTTCCATAAAATCCAATCCCAAGGAGAAGACCCTGATCAACCCAGTTTCATTCTAAAGCCATACAATGCCCTCGTCATAGCACCAAATTTACCCTCTCTTCAACTTGGCTCTCTCGAAAACCACCTCTCTCTAACCTCCCTAGGCTCAGATTTCGAACCGGCTAACATTGTACCACAACTACGGTCTGTGTTAAAGTTTGTTTTTGCATGTTCCAACGGTTTGCTCGTATATGGAAACCCTCGTCCACGTCACAAATGCGTATACCACGTACGTAACCCACTTACAAAGGATTCATTGAAACTCCCTTGTGCTCCAACTCTCTGTGACCACGCTGGGGTTCTCGTGGGTTTCATGTGCGATCCTTATTACTCTCTTGCAAAAGAGAACTCCGGCGTATCTATCTTTCCCACTTCTGAACGCAGGTTCAGGGTGGTTCGCATCCCTGCGTTCAGCGACACGAGGGTTACGTTTGATGTTGAGGTTTTCTCTTCCGAGACAGGGGAATGGAAGCGGTTTGTGGTGTCGTGTCCACAGGGGTTTGCGTGCGGGTTTTTTCTGACGTCATCGAGCGTTGAGCACGAAGGGAAGTTGTACTTCATGGGTGGAGGGAGGGTTCTCGTGTATGACCCTTATGGTGATGTGTGTGTGGCTTCTGTGATTGAACTTCCCCGTGGCTTTGGCGAAGCGTATAGAGGGTGCCTTGGGGTTTCTTGTGGAAAGTTGCAGTTATCTGAGTTCCCTATCTCACCCTCCACTGCCTTTGAAGCTTACAGTGGGAGGGTTTGGGAGTTGCAATATTGTGGGAAGGAAGAAGAAAGAAGATGGAAACTGGTGCATGAGTTTTCTCTCCCTGAGATTATTGGGCCAATGTTTCAAGAGTTGAAAGCCTTGGAGGTTGAATATGTGAGGGGTTGCAGTAGGATTCTGGCTTTTCATCCCTATGTTAAGGACAGTGTGTTTCTTAAGTTTGGTGATAACATCATTTGCTGCAATTTGTTAACTCGTAGGTTTAGGGTTTGCAAATACGGTGGTCTCTCCTTGCTGTTTTATCCGGTGATCCCAGTTCTGCTCCCTTGGTGGCCAACTCCGATTCCTTCGTCACCCTCATTGCTTGATCCTTCTGTATAG 1308 0.4709 MAATKSNTTINNLFDDSLTEIFCKLPCKSLFSCKSVSKHWLTLISNTNFHSLYLTHQHTLFHKIQSQGEDPDQPSFILKPYNALVIAPNLPSLQLGSLENHLSLTSLGSDFEPANIVPQLRSVLKFVFACSNGLLVYGNPRPRHKCVYHVRNPLTKDSLKLPCAPTLCDHAGVLVGFMCDPYYSLAKENSGVSIFPTSERRFRVVRIPAFSDTRVTFDVEVFSSETGEWKRFVVSCPQGFACGFFLTSSSVEHEGKLYFMGGGRVLVYDPYGDVCVASVIELPRGFGEAYRGCLGVSCGKLQLSEFPISPSTAFEAYSGRVWELQYCGKEEERRWKLVHEFSLPEIIGPMFQELKALEVEYVRGCSRILAFHPYVKDSVFLKFGDNIICCNLLTRRFRVCKYGGLSLLFYPVIPVLLPWWPTPIPSSPSLLDPSV* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0218 435 Pfam F-box domain 11 50 IPR001810 GO:0005515
Vra5g0218 435 Gene3D - 3 53 - -
Vra5g0218 435 SUPERFAMILY F-box domain 7 76 IPR036047 GO:0005515
Vra5g0218 435 SMART fbox_2 13 53 IPR001810 GO:0005515
Vra5g0218 435 PANTHER OS08G0529300 PROTEIN 7 428 - -
Vra5g0218 435 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 7 428 - -
Vra5g0218 435 SUPERFAMILY Galactose oxidase, central domain 213 276 IPR011043 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0218 - - gmx:102666623 712.22