Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0209 ATGTTAGCTTCTTCTCTTTCCTTCCTTCATTCCTGCGGATTCCCTTCTTCCGCTTCTTCTTCTTCTTCCTCTTCCTTATCTACACTATCACAACCAAACCCCAAACCTTTCGTCGTTGAAGCCAAAGTTAGGACCCGAAGGGAAGACAGAACTGCGCGCCACACGCGCATCAGAAAGAAGGTTGAAGGGACACCCGAGAGGCCGAGGTTGTCGGTGTTCCGATCCAACAAGCACCTCTCTGTGCAGGTGATTGATGACACCTCAATGCACACTCTTGCTTCGGTTTCCACAATGCAGAAGACCATTGCTGAAGAGTTTAATTACTCAGCTGGCCCCACAGTTGAAGTAGCAAAAAGGATGGGTGAGATCATTGCAAAGTCCTGTTTGGAGAAGGGGATCACTAAGGTAGCCTTTGATCGAGGGGGATACCCATACCATGGCCGTGTTCAAGCACTTGCTGAAGCAGCTCGTGAACATGGCCTAGATTTCTAA 492 0.4898 MLASSLSFLHSCGFPSSASSSSSSSLSTLSQPNPKPFVVEAKVRTRREDRTARHTRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTSMHTLASVSTMQKTIAEEFNYSAGPTVEVAKRMGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALAEAAREHGLDF* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0209 163 MobiDBLite consensus disorder prediction 11 34 - -
Vra5g0209 163 MobiDBLite consensus disorder prediction 40 55 - -
Vra5g0209 163 TIGRFAM L18_bact: ribosomal protein uL18 47 163 IPR004389 GO:0003735|GO:0005840|GO:0006412
Vra5g0209 163 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 16 163 IPR005484 GO:0003735|GO:0005840|GO:0006412
Vra5g0209 163 Hamap 50S ribosomal protein L18 [rplR]. 45 163 IPR004389 GO:0003735|GO:0005840|GO:0006412
Vra5g0209 163 CDD Ribosomal_L18_L5e 57 161 - -
Vra5g0209 163 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 45 163 IPR005484 GO:0003735|GO:0005840|GO:0006412
Vra5g0209 163 SUPERFAMILY Translational machinery components 46 161 - -
Vra5g0209 163 Gene3D - 45 163 - -
Vra5g0209 163 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 16 163 - -
Vra5g0209 163 MobiDBLite consensus disorder prediction 11 55 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0209 K02881 - gmx:100778569 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0209 5 1766217 1768069 Vra5g0209 5 1766217 1768069 ECH