Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0197 ATGAAGAAACTCAGATGGGTAATGGATGGAGGAGGGTTTTGGGATTTGGACATTTCAACTTCTCAAACCATTGATGGCTTGGCCCGTGCCGTCCCAGGGGACCCTCTTCCCTTGGGTCTCTCACGAGGCATAAGGCTTTCCAGACCCAGACAACTCGAGTTCATGCACCGTTTCATGAATGCCCCTCTCATTCCCTCCTACTCCAAACCTCATGGCCTCTCCCTCCACCGTCTTATCTCCCTCCCCTTTTCTGATGATTGGGTTTTATTTTTACTGGGTCAGTTCAATTTGCAGAGGTTTGTTTCCTCTGTTAAGAGCAGTGAGGAGAAGCCAAAGGGGGTTTCTTCTTGGTTAAAAACCTTTGGGAGACATTTGCAGCAGAAGTCCTTGTATGCCTTGGGTTTCTCTTCAGAGTTTCAGTTGGGGGAAAATGATATGTTGTTTTTTGGCTTAGATGCTTATGATGATAACGAAAAGCCTCGTGGGAAATTCGTCTTTCACCATAAGTTTCCAGAGCATGATCTAACAGTGGAAGCAGTTTCTCCTGGTCTTTTTGTTGATAATAACACCGGTAATTACTGGGATGTGCCATTTTCAACTGCAGTTGATCTTGCTTCTGTGACTACCAGTGACTCTTCCATCGCTTATCATTTGTCGGCACACTACACTTCTGGGTCACCCAAGCAGTTTCAAAATATTCATAACCATAATGATAGAGTACCACCTTCTCTACTTCCTGGCTTGGCCTTCAAAAGTGCCGTTTCTTACAGGAAAAAAGTTGGTATTTGGAGAAGTGAAGCTCCAAAGTTGAAATTGGTGCAACCGTATGACGTGTTTCTTTCAAATCCTCACGTGTCTGCCTCAGGGATTATTGGTGCTGCTTCAACCGCTGCATTTGGGGATAATTCAGCAAGAGCACAAATAGAAGATGGTAGTCCAGGATATTTTCTCCAGGTTTCTGGAGTAAAGTCTTCCTTTCTAGCAGATATGTTTGCATCTGTTTCATTCACGGCTCAACATGGAAACTTCCAGAAGCCTTTTCTAGATCTTACCCGATTTCAGGCCCGGCTGGATTTCCCTTCTGGTTTCAAATTTCTTTCAGCTGCAACTGGTCTAACTCAAGATCTTCTCAATTCTCAAAAGCCCAGCTTGGAAGCTGTTCAGGCGATTTTACCTAATGCTACACTATCACTTCAGCAGCAGATTGTTGGTCCTGTCAGTTTTAGAGTTGATTCTGGAATCAAAGTTGATCTGAAGAACCCTGATTGGCCTATTCATGCACTGGAACCTGTATTTGCTTTGGAATATGCATTGCAAGTGCTTGGTTCAGCAAAAGCAGTTGCATGGTATTGCCCCAAACGCCAAGAGTTTATGGCAGAACTTCGTTTCCTTGAAACATAA 1401 0.4404 MKKLRWVMDGGGFWDLDISTSQTIDGLARAVPGDPLPLGLSRGIRLSRPRQLEFMHRFMNAPLIPSYSKPHGLSLHRLISLPFSDDWVLFLLGQFNLQRFVSSVKSSEEKPKGVSSWLKTFGRHLQQKSLYALGFSSEFQLGENDMLFFGLDAYDDNEKPRGKFVFHHKFPEHDLTVEAVSPGLFVDNNTGNYWDVPFSTAVDLASVTTSDSSIAYHLSAHYTSGSPKQFQNIHNHNDRVPPSLLPGLAFKSAVSYRKKVGIWRSEAPKLKLVQPYDVFLSNPHVSASGIIGAASTAAFGDNSARAQIEDGSPGYFLQVSGVKSSFLADMFASVSFTAQHGNFQKPFLDLTRFQARLDFPSGFKFLSAATGLTQDLLNSQKPSLEAVQAILPNATLSLQQQIVGPVSFRVDSGIKVDLKNPDWPIHALEPVFALEYALQVLGSAKAVAWYCPKRQEFMAELRFLET* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0197 466 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 4, CHLOROPLASTIC 1 466 - -
Vra5g0197 466 PANTHER EXPRESSED PROTEIN 1 466 IPR044160 GO:0034196|GO:0070300|GO:1990052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0197 Vra-Chr5 1612252 1615764 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0197 - - gmx:100793455 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0197 5 1612252 1615764 Vra5g0197 5 1612252 1615764 ECH