Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0196 ATGGTTGAATGCCACGTTAAAGAAAGAGTTATGACGTCAAGTACCCAAGTCTACGGTGAACCATGGTACTGGGACAACCGCTACACCAACGAACCTGGTCCCTTCGATTGGTATCAAAAGTACATCACTTTGGCTCCCATCATCAGCCTCTATGTCCCTCCTACCCAACGCATCCTCATCGTTGGTTGTGGCAACTCAGCCTTCAGCGAAGGCATGGTGGTTGATGGCGGTTACACAGATGTTGTCAACATTGATATATCTTCGGTGGTTATTGAAGCTATGAAAAGCAAATACCGAGATTTTCCCCAATTGAAATATGTGAAAATGGATGTGAGAAACATGAGTGATTTTGAATCAGAGTCTTTTGATGCTGCTATTGACAAAGGGACTCTTGACTCTATCTTGGTGACATATGGAGCTCCGCTATATCGCCTACGTTTGCTACGGGAATCATGCTCATGGACAATAAAACTCCATGTCATAGAGAAACTTGCCTCAGAAGAGAAATCTGATCAACCAGTTTGGGAGCTTACAAAACCTGTTCCCCTCAATGATGATGGAACCTCTGTGGAGGAAGCTCTAGGAAGGAATCCTGATGTCCATTACATATACATTTGCACTAAGGAAATTTCTGCTAACTCAAACACAAAGCCATGA 657 0.4353 MVECHVKERVMTSSTQVYGEPWYWDNRYTNEPGPFDWYQKYITLAPIISLYVPPTQRILIVGCGNSAFSEGMVVDGGYTDVVNIDISSVVIEAMKSKYRDFPQLKYVKMDVRNMSDFESESFDAAIDKGTLDSILVTYGAPLYRLRLLRESCSWTIKLHVIEKLASEEKSDQPVWELTKPVPLNDDGTSVEEALGRNPDVHYIYICTKEISANSNTKP* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0196 218 Gene3D Vaccinia Virus protein VP39 16 213 IPR029063 -
Vra5g0196 218 Pfam Methyltransferase domain 61 134 IPR013216 GO:0008168
Vra5g0196 218 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 11 208 - -
Vra5g0196 218 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 11 208 - -
Vra5g0196 218 CDD AdoMet_MTases 57 150 - -
Vra5g0196 218 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 134 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0196 Vra-Chr5 1609116 1611625 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0196 - - vra:106762410 429.483