Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0193 ATGAGATGCTCAATGTTGGTATATCTCTTTCTGGTAGCACAAGAAGTCACATGCTTCGACAAACATGCACCACCATTGTCCCATTTCAGGATCAAATTTAAGGATAGAATGGCCTTGGCCGTTGCCGTATCATCCCAGCCACCCTCTGCATCTCCATCTACCAAGATGAGTGGGAGAGTGGTGTATCCAGCTGAGTATGGTGCAGACCCCACAGGGGAAGATGAGAGCAGTGATGCAATTGTGAAAGCTGTTGAAGATGCTTTTGGGATTGAGAGTGAAGTTGAGCTGGTAGCAGGAATTAGAGACCTTGGAGGGGTTTGA 321 0.4735 MRCSMLVYLFLVAQEVTCFDKHAPPLSHFRIKFKDRMALAVAVSSQPPSASPSTKMSGRVVYPAEYGADPTGEDESSDAIVKAVEDAFGIESEVELVAGIRDLGGV* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0193 106 PANTHER POLYGALACTURONASE QRT3 6 106 IPR039279 GO:0004650
Vra5g0193 106 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 6 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0193 Vra-Chr5 1579443 1580333 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0193 - - vra:111241560 201.06