Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0186 ATGAAGTGGGCAAAGTATGTGGTGGCTTTTGGAGCCCTGAAGGGAATGACTGCAGTGCTTCTGGTGGGGAGATTGGCACAGGCACGTTATATTACTCAGATTGCACGATGCCACATGATCCCACCATGGTTTGCTCTTGTGCACCATAAGACCGGAACCCCAATAAATGCTACATTGTTGATCACCATTGCAAGTGTCATCATAGCTTTTTTCACAGGCTTGAAGGTGCTGTCAAGCTTGATATCTGTGAGCACACTCTTCGTCTTCATGATGATATCTATTGCCCTTCTGGTGAGGAGGTACTACGTCAGAGGGGTCACACCAAGGGAGAACCTGTTAAAGCTAGTTATCTTCTTGGGGCTTATCATTGCTTCTTCAATGGGAATTTCAGCCTACTGGGGGCTGAGGCCGAGGCCTAATGGTTGGTTTGGATACACTGTGACTGTTCCTGTTTGGTTCTTGGCAACTCTAGGGATATCATTGTTTTTGACTCAGCAGAGGGTGCCAAGAGTTTGGGGGGTTCCACTTGTCCCATGGTTGCCATCTTTGTCAATTGCAACAAATGTATTCCTGATGGGGTCTTTGGAGTATGAAGCCTTCATAACATTTGGAGCGTGCACAGTGGTAATGCTGATCTACTATTTTCTCTTTGGACTTCATGCAACTTATGATATGGCTCACCAACAAGAAAAGCTGCAATCAAAAGTTGATCACAGAGAAACCATCAAGAATGAAGGGCCATAG 744 0.457 MKWAKYVVAFGALKGMTAVLLVGRLAQARYITQIARCHMIPPWFALVHHKTGTPINATLLITIASVIIAFFTGLKVLSSLISVSTLFVFMMISIALLVRRYYVRGVTPRENLLKLVIFLGLIIASSMGISAYWGLRPRPNGWFGYTVTVPVWFLATLGISLFLTQQRVPRVWGVPLVPWLPSLSIATNVFLMGSLEYEAFITFGACTVVMLIYYFLFGLHATYDMAHQQEKLQSKVDHRETIKNEGP* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0186 247 PANTHER CATIONIC AMINO ACID TRANSPORTER 5 1 235 - -
Vra5g0186 247 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 1 235 - -
Vra5g0186 247 Gene3D Amino acid/polyamine transporter I 1 157 - -
Vra5g0186 247 Pfam C-terminus of AA_permease 172 221 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0186 Vra-Chr5 1520022 1521778 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0186 1 229 Organic Solute Cotransporters AT2G34960 70.306 2.96e-111 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0186 - - vra:106761930 496.123