Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0163 ATGGCAACCACATCGCCATCTGCAGCATTGCATCATCAGTTTCTCGAAAGCCCTCGCGAGAACGGCACAAATGATGTTGAAACTGAGATAGTTGATGTGGAAGAATCGCTTCCAAATCTTTCCTCATTCATGGAGAACAAAGAAGAGAACAACGAGGAAGATCAAAAGTTCACAACCAACAAGAGGTATATGCCTCTTTTACTTATCAATTACGTTCTACTTTTTGTTGGGTCATTCTCTTCGAGTTTGATGTCAAAATATTACTTCATCCACGGAGGTGCTAACAAATGGGTTTCTACATTGGTTCAGTGTCTTGGTTTTCCTATCCTACTCTTTCCCATTTTTGTCCCAGTTGTCCTTAAATACACAAAAAGAAAACCTTTTGAAGGTTTCAGCAAAAAGATGTTCTTGTCTACCGTTTTAGTCGGTATCATGTTAGGGTTTAACAACCTTTTAATCTCATGGGGTGTAGCATACCTTCCAGTTTCAACCTCATCACTTCTTTTGTCCTCCCAGTTAGTTTTCACCCTTATTCTGTCTTCCCTGATTGTGAAACAAAAAATAACCTTTACAAACCTAAATTGTGTGATCCTCATAACCGTTACTTCCATCATTCTAGCCTTGGATTCTAGTCACGAGAAGCCAGCAGGGCTCACAGACAAAGAATACTACATAGGGTTCACCTGCACCATCGCTGCAGGTTTTTTGTTTGCTTTGTATTTGCCAGTGATGGAGAAGATCTACCGGAAGGTGAACTGCTACCAAATGGTGATGGAAATGCAGCTCATAATGGAGATTGTAGCAACAGTATTGGCCACTATAGGCATGGCATGTGACGGAGGGTTTTCTGACATGAAAAAAGAGGCCGAGAGCGTTTTCGACAAAGGAACCGCAGCTTATTGGGTAACCATTTTGTCGACTGTGGTGACATGGCAATGTACCTTTATGGGAACTGCAGGAATGGTTTTTCTGACATCTTCTCTAACTGGGGGGATTTGTTCCACTGCTCTGTTGTCCATAAATGTGTTGGGAGGAGTGGTGGTTTATAAAGACCACTTTGGAGGTTACAAGGCTGTCTCAACTGTTTTGTGCATTTGGGGCTTCTGCTCTTATGTCTTTGGCATGTACATCAAAACGAAGAAAAAGAAGATTGTAAGGAAGAACAGCAGCAGTACTGGATCTTCCACTGAGTTGATCCCTAGAAACTCTGATGGAATTTAG 1221 0.4177 MATTSPSAALHHQFLESPRENGTNDVETEIVDVEESLPNLSSFMENKEENNEEDQKFTTNKRYMPLLLINYVLLFVGSFSSSLMSKYYFIHGGANKWVSTLVQCLGFPILLFPIFVPVVLKYTKRKPFEGFSKKMFLSTVLVGIMLGFNNLLISWGVAYLPVSTSSLLLSSQLVFTLILSSLIVKQKITFTNLNCVILITVTSIILALDSSHEKPAGLTDKEYYIGFTCTIAAGFLFALYLPVMEKIYRKVNCYQMVMEMQLIMEIVATVLATIGMACDGGFSDMKKEAESVFDKGTAAYWVTILSTVVTWQCTFMGTAGMVFLTSSLTGGICSTALLSINVLGGVVVYKDHFGGYKAVSTVLCIWGFCSYVFGMYIKTKKKKIVRKNSSSTGSSTELIPRNSDGI* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0163 406 PANTHER OS09G0467300 PROTEIN-RELATED 30 389 IPR030182 GO:0015211|GO:0016021
Vra5g0163 406 MobiDBLite consensus disorder prediction 1 21 - -
Vra5g0163 406 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 30 389 - -
Vra5g0163 406 Pfam Purine nucleobase transmembrane transport 66 381 - -
Vra5g0163 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 126 212 - -
Vra5g0163 406 MobiDBLite consensus disorder prediction 1 23 - -
Vra5g0163 406 Gene3D - 104 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0163 Vra-Chr5 1308689 1310241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0163 46 374 Organic Solute Cotransporters AT1G30840 61.631 2.18e-138 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0163 - - gmx:100795076 500.745