Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0162 ATGACCCCTTCTGTCAATAAGCACAACACAAGTGAAATTGAGTTCACTCATCGTGAAAGTGAAGAAGAGGTAGTACATTTGCATGCAGATTCAGCTCTTTCCATGGACAACAACACAACAATGCAGGTGCATGCAGATCAAAAGTGTATCACTAACAAGAGGTACATGCCCCTTTTGGTGATTAACTATGTCTGTCTCTTTGTGGGTTCTCTTGCTGCTAGTTTGCTCTCTAAGTATTATTTCATCCACAAAGGTTCAAGCATTTTGGTTTCAACCTGGGTTCAAACCGCAGGCTTTCCTCTCTTGATCATCCCAATTTCTCTCCCTTATCTCCTTAAACTCACAAACAGGGTGCCCTTCACCGATTTCACTCCAAGAATGTTAGTTCTCTCGGTTTCAATTGGCGTTATGTTAGGATTCAACAACCTTTTCTTCTCATGGGGAAATTCATATCTTCCCATTTCAACCTCAGCGCTTTTGCTCTCTTCCCAACTTGTTTTCAACCTTATCTTCTCTGTCATCATTGTCAAGCAAAAACTAACCTTTTCAAACGTTAACTGTGTCATCCTTCTTACCTTGAGCTCCATCCTCCTAGCCTTGGACTCCAGCCACGAGACACCAAAGGGGCTCACACGGAAGGAATACTTCTTTGGATTCTTCTGCACAATAGCCGCGGGCCTGATGTTTGCGTTCTACCTGCCTCTGATGGAGAAGATCTACAGGAGGGTGAATTGCTATGAAATGGTGATGGAAATGCAGCTCGTGATGGAGTTGGCAGCTACAACACTGGCCACGGTTGGCATGGCAGGTGGGGGTGGATTTGCTAAGATGAAGGCAGAAAGTAGAATGGTGTTTGACAAGGGATGCGTGGTTTATTGGGTGACGGTGCTGGGAAATGTGGTGACTTGGCAGCTGTGTTTCATGGGAACTGCAGGAATGGTGTTCTTGACATCTTCTCTGACAGGGGGCATTTGCATGACAGCATTGTTGTCCATGAATGTGTTGGGAGGAGTTCTGGTCTACAAAGATGCATTCGGTGGTTTCAAAGCTATCTCCACTGTTCTCTGCATTTGGGGGTTCCTTTCTTATGTCTATGGCATCTACAAACTCAATCGAAAGGAGCAACACAAAGCTCTCACCAGGAACAAGAACCACATCGTCAACATTGCGGCTAACTGA 1179 0.4512 MTPSVNKHNTSEIEFTHRESEEEVVHLHADSALSMDNNTTMQVHADQKCITNKRYMPLLVINYVCLFVGSLAASLLSKYYFIHKGSSILVSTWVQTAGFPLLIIPISLPYLLKLTNRVPFTDFTPRMLVLSVSIGVMLGFNNLFFSWGNSYLPISTSALLLSSQLVFNLIFSVIIVKQKLTFSNVNCVILLTLSSILLALDSSHETPKGLTRKEYFFGFFCTIAAGLMFAFYLPLMEKIYRRVNCYEMVMEMQLVMELAATTLATVGMAGGGGFAKMKAESRMVFDKGCVVYWVTVLGNVVTWQLCFMGTAGMVFLTSSLTGGICMTALLSMNVLGGVLVYKDAFGGFKAISTVLCIWGFLSYVYGIYKLNRKEQHKALTRNKNHIVNIAAN* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0162 392 Pfam Purine nucleobase transmembrane transport 58 373 - -
Vra5g0162 392 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 31 379 - -
Vra5g0162 392 PANTHER OS09G0467300 PROTEIN-RELATED 31 379 IPR030182 GO:0015211|GO:0016021
Vra5g0162 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 108 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0162 Vra-Chr5 1300326 1301939 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0162 42 366 Organic Solute Cotransporters AT1G30840 63.363 2.66e-136 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0162 - - gmx:100803560 540.421