Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0159 ATGGATCCAAATCCTGATGCAATTAAGGAGGATTTGAACCGGTTTAGGTATTCTGTCAGTGAAAATTTCAACAAAGTTCAAAAGCTTGAAGAGCAAGTTGCTGAGGTTGAAAAGTTCTACCTTTCGACTAAAGCTCAAGTTAATAGTGTCAAAGACAAAGGCCGGGAGAAGCTTGTTATTGGCAGTAGAAGATCACAGCAAGGTTCATCAAGTAAGGAACCTAATTCTTCAAACGCAATGCAAGAGGTTATACAACAGTTTTCCACAATATTGCATCAGATAGCTGAGCATAAATGGGCTTGGCCCTTCTTGGACCCTGTAGATGTTGAAGGTCTTGGGTTGGATGACTATCATGAGGAAAATGAACAATTAAAGGAAGAAGCACATATGCAGATGGAAAAGCAGCTTGCTCAAGAAGCTACTTATGCCAATATGGCAAAGGATATAAGCATTTCGCTATGCGAGGTTGAGGTGCACTTAAAGAATCTCAAAGAAATGGTCATTGAAAAGTGCAGGAAAATATCGATTCGTGAGAGACTGGAACTTGTTAAGTCTTTCAGCAGACTGAATTTTGAGAATCTCAACAAGGCATTGCAGATAATTTCTGAGAATGACCCAACCTTCAAACCTAATGATCAAGAAGTGAACCTTGACCTTGATAAGCAGACCGACTACACAGTATGGAAACTGAACGTTTTTGTCAAAAAAGCACTGGAAGAACAGGGAAAAAATGCTGCTGAGGAGCGAAATGTTAATCACAATGGTAACTTTGAGGAAAAGAAAAACACCAACAAAAGGAGGAAAATGTGA 810 0.3938 MDPNPDAIKEDLNRFRYSVSENFNKVQKLEEQVAEVEKFYLSTKAQVNSVKDKGREKLVIGSRRSQQGSSSKEPNSSNAMQEVIQQFSTILHQIAEHKWAWPFLDPVDVEGLGLDDYHEENEQLKEEAHMQMEKQLAQEATYANMAKDISISLCEVEVHLKNLKEMVIEKCRKISIRERLELVKSFSRLNFENLNKALQIISENDPTFKPNDQEVNLDLDKQTDYTVWKLNVFVKKALEEQGKNAAEERNVNHNGNFEEKKNTNKRRKM* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0159 269 ProSiteProfiles NET domain profile. 164 245 IPR027353 -
Vra5g0159 269 MobiDBLite consensus disorder prediction 62 78 - -
Vra5g0159 269 PANTHER TRANSCRIPTION FACTOR GTE1-LIKE ISOFORM X1 8 119 IPR017413 GO:0005634|GO:0006355
Vra5g0159 269 PANTHER TRANSCRIPTION FACTOR GTE1-LIKE ISOFORM X1 119 267 IPR017413 GO:0005634|GO:0006355
Vra5g0159 269 Gene3D - 42 123 IPR036427 GO:0005515
Vra5g0159 269 PANTHER OSJNBA0053K19.4 PROTEIN 8 119 - -
Vra5g0159 269 PANTHER OSJNBA0053K19.4 PROTEIN 119 267 - -
Vra5g0159 269 MobiDBLite consensus disorder prediction 52 78 - -
Vra5g0159 269 MobiDBLite consensus disorder prediction 244 269 - -
Vra5g0159 269 SUPERFAMILY Bromodomain 73 119 IPR036427 GO:0005515
Vra5g0159 269 Coils Coil 114 134 - -
Vra5g0159 269 MobiDBLite consensus disorder prediction 244 263 - -
Vra5g0159 269 Pfam Bromodomain extra-terminal - transcription regulation 174 236 IPR027353 -
Vra5g0159 269 Gene3D - 168 244 IPR038336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0159 Vra-Chr5 1278418 1284896 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0159 - - vun:114164810 273.478