Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0155 ATGGCTCCTGTACCTAATTCTCCTGTGAAAGTTGGGCATATTGATGATGTCCAAGAGCTTAGAAAAACAAAGCCAAGAACAGTTCCACACAGATTTGTAAGAGACATGACAGACAGACCAACACTTCCTACCACACCTCTTCCTCCACCAGATACTCACATGCCTGTCATTGATTTTTCTAAGCTTACCAAAGGAAACAAAGACGAAATTTTCAATCTTGCAACTGCTTGCCAAGAGTGGGGATTTTTTCAGGTAATCAATCACGAGATTGACCTCAATCTGCTAGAGAGAATAGAGAACCTGAGCAGGGAGTTTTTCATGCTACCTTTGGAAGAGAAACAGAAATACCCTATGGCTCCTGGTACTGTTCAAGGATACGGACAAGCTTTTGTTTTCTCAGAGGACCAGAAGTTGGACTGGTGCAACATGTTTGCTCTTGGACTCGAACCTGAATATCTAAGGAACCCAAATCTATGGCCAAAGAGACCAGAAAGATTCAGTGAAACGGTGGAAGAGTACTCAAGAGAAATAAGGAAACTGTGCTATAATCTGTTGAAAGACATAGCTTTAGGCCTGGATTTGAAAGGGGATGTGTTTGAGAAGATGTTTGGTGTATCAGTGCAAGCCATAAGGATGAACTACTACCCTCCATGTTCTAGGCCTGACCTGGTTTTGGGTCTGAGTCCCCATTCAGATGGAAGTGCTCTCACTGTGCTGCAGCAAGCAAAGGGAGGCCCAGTGGGACTTCAGATACTCAAGAACAATACATGGCTTCCTATTCAGCCAATTCCAAATGCTCTTGTCATCAACATTGGAGACACGATAGAAGTTCTTACAAATGGAAAATACAGGAGTGTGGAGCATAGAGCAGTGGCTCATGAGGAGAAAGATAGACTATCAATTGTGACATTTTTTGCTCCCAGCTATGAGGTAGAGCTTGGTCCAATGCCAGAATTTGTGGATGAAAACCACCCATGCATGTATAGAAGATACAATCATGGGGAGTACAGTAAACACTATGTAACAAACAAGTTGCAAGGGAAAAAGACACTGGACTTTGCAAAGATCCAAACCAAAAACACAAACTAG 1089 0.427 MAPVPNSPVKVGHIDDVQELRKTKPRTVPHRFVRDMTDRPTLPTTPLPPPDTHMPVIDFSKLTKGNKDEIFNLATACQEWGFFQVINHEIDLNLLERIENLSREFFMLPLEEKQKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGLEPEYLRNPNLWPKRPERFSETVEEYSREIRKLCYNLLKDIALGLDLKGDVFEKMFGVSVQAIRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQAKGGPVGLQILKNNTWLPIQPIPNALVINIGDTIEVLTNGKYRSVEHRAVAHEEKDRLSIVTFFAPSYEVELGPMPEFVDENHPCMYRRYNHGEYSKHYVTNKLQGKKTLDFAKIQTKNTN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0155 362 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 206 307 IPR005123 -
Vra5g0155 362 PANTHER PROTEIN SRG1 10 359 - -
Vra5g0155 362 Gene3D - 12 348 IPR027443 -
Vra5g0155 362 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 359 - -
Vra5g0155 362 SUPERFAMILY Clavaminate synthase-like 16 348 - -
Vra5g0155 362 Pfam 2OG-Fe(II) oxygenase superfamily 208 306 IPR044861 -
Vra5g0155 362 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 161 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0155 Vra-Chr5 1242734 1244683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0155 41 356 Glycosyltransferase AT5G59530 34.848 2.04e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0155 - - gmx:100785152 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0155 5 1242734 1244683 Vra5g0155 5 1242734 1244683 ECH