Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0143 ATGTCTGGGGTTTGGGTTTTCAAGAACGGTGTGGTGAGGCTAATGGAGAACCCTGAGTCTGAAATATTGGAGAAGAAGGTGAAAGGGAAGGTGCTGGTCGACATGGCAAGCGGTGAACCCATTACTTCCTACACAGTGCTCGAGAGAAAGCTGAAGGCATTGGGGTGGGAGCGTTACTACGATGACCCTAACCTTCTTCAGTTCCACAAAACCTCCTCCATAGACCTAATCTCACTCCCAAAGGATTTCACCAACTTCACCAACATTCACATGTACGACATAGTCATCAAGAACAGGAACTACTTCCAAGTTACAGACATGTAA 324 0.466 MSGVWVFKNGVVRLMENPESEILEKKVKGKVLVDMASGEPITSYTVLERKLKALGWERYYDDPNLLQFHKTSSIDLISLPKDFTNFTNIHMYDIVIKNRNYFQVTDM* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0143 107 PANTHER FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 2 1 107 - -
Vra5g0143 107 PANTHER FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1 1 107 IPR039274 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0143 Vra-Chr5 1156503 1157078 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0143 - - vra:106762585 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2855 7 48697975 48698782 Vra5g0143 5 1156503 1157078 PCT