Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0136 ATGGCTTCTCAAACCTTGCACGACGCAAAGAAATCACAAGCCAGAAGAGCATTACGATCCCTAGCCATAGGCATAGCAGTTCCCTTCAGCCTAACACTCACCATAATCATTCTTTTCGGTTCAGGACGAAGGTACAACAGCATCTCAAAGCCCTTCTGGTTTGCACCACTATGGTTCATTAACATGGCTTCCTTAGCTTCGTCTTTGTTCATGGGTCTTGCAGCATGGTTAGTCTGGGCTGACGGTGGCTTCCAAGGAGAAACCGATGCTATGTCTCTTTACATAGCTCATCTCTCTCTCAGCATTGTCTGGCACCCTCTTGTCCTCATCATGGCTGCTTATTGGCTTGCTTTGCTTTCTTCCATCGTCAACTTTTGCACCCTCTTTATGTGCTACTTGAGGTTTAGAAAGATTAACCCTTTTGCCAAAGATCTAGCCAAACCTTGTTTGGCTTTCGCTTTGTATCTTTCTCTTGTTAGCTTCAAGCTAATGTTTATCTGA 501 0.4471 MASQTLHDAKKSQARRALRSLAIGIAVPFSLTLTIIILFGSGRRYNSISKPFWFAPLWFINMASLASSLFMGLAAWLVWADGGFQGETDAMSLYIAHLSLSIVWHPLVLIMAAYWLALLSSIVNFCTLFMCYLRFRKINPFAKDLAKPCLAFALYLSLVSFKLMFI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0136 166 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 3 166 IPR004307 GO:0016021
Vra5g0136 166 Pfam TspO/MBR family 42 164 IPR004307 GO:0016021
Vra5g0136 166 Gene3D TspO/MBR protein 15 165 IPR038330 -
Vra5g0136 166 CDD TSPO_MBR 21 158 IPR004307 GO:0016021
Vra5g0136 166 PIRSF PBR 10 166 IPR004307 GO:0016021
Vra5g0136 166 PANTHER TSPO/MBR FAMILY PROTEIN 3 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0136 Vra-Chr5 1132914 1133414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0136 K05770 - gmx:100790873 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0136 5 1132914 1133414 Vra5g0136 5 1132914 1133414 ECH