Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0129 ATGGAAATGGAGGAAACTGTGGCTCGTGTAATCTCTGAGATAGAGGAATTCCGCGGAAGCCATGAACAACCACCGCTTTCAGAACAAACCCTAAGGGATCTTCAAATTCTCCTCAACAATTCTCTATCGGAGAGCCTCTACGATGAGCTTCCATCGAAGAATCTCTCTCCCTCTGCTCTCATCGCTCCAATTGCTTCCGCAATGGACTCTTCCCCTTCCCACCACTCTCTCCTCGCTTCCGATGTCTTCCTCTCGCTTCTCCTCGCCCCAAACGCTCCCGTTTTCACCCTCTTCACTCCCATATCTTTCCTTTCCTTCCTCCGCTCCCTCCGCCGCTCCTGCAAAGCTCACTCCAACCCAGGCCCGGCTCAAGAGACCTCGCAAAACCGCAAGAGAAAGCGTGCTGGACGGATCCGTGCCAAAAATCCCCAAAACGACAACGATTCGACGGACACCAGTTCGCAACACGACCCCAAGTTGCTCCTCCGCGTGCTGGAGAAGCTAGTCCGGGTAATGGACTTTATCCACCTGGACCGTTTTCCGGAAACTCTCCGGTCGCTTGTCCAAACCATCGCCGAAATCCCCGTCACTGCGCTCGACGCGTGCGGGAACGCGGCGCAGTATAGCAAGTTGCTCAACCTGTGTTCTCGCGTGCTGAGGGAGGTTCTCAAACCTGAGCATGGGGAATCTTCCAACTCTGCCGCCGAGGTATTGAAGTCGCTCTGTCCGCTTGTTCTCATGGCGAAGTCACAGGCGCGGAGCTTTGCTCTTGAATTTGTAACAAGTCTTGGTGACCGGTGCGATGGGGTTAAGAAAGCGCTGGTTAATTTTCCGAGGTATTTGGTTAAGAAGGCGCCAGAGAGGGCCGAGCCTAGAGCCTTGGCTGTGGACTCAATCATTGAGGTTGTCAGGGCGGTGAAAGTCGAGGATCAGATTGCGTTTGTGAAGTACGTTGTGCAGATGACTCAGGGGAAGGCGAATCTTCGGCTTTTGGCGGTTGATCTTATTCTGAATTTGATGACTTCTTTGAAGGATCCATTAGGTGTGGAGAGTGAAGGGAGTGAGGCCTGGGGAATGTGGTGTTTGGAGGCGTTGATGAAGAGGTGTTCTGATGTGAGTGGCGGGATCCGGGCGCGGGCTTTGTCGAGCTTGGCGCAGCTTGTGGGTTTGTTGTCCCGTGGTGAAAGGACTAGCGTGGTTTTGAAGGAGTTTTTGGGGTTTGGAAACGTTGGTGGTGAGAATGCTGAGGGTACAATGAATGATATGCTGAGGAGAAGGTGTATGGATGATAAGGCAGCTGTGAGGAAAGCCGCATTGCTTTTAGTTACTAACCTGACTTCTCTTCTTGGAGGTGCAATTGATGAAGTGGTTCTCAAGACAATGGGCATGGCTTGTTCGGATCCACTTATCAGCATGCGGAAAGCCGCTATTGCAGCTCTTTCACAGGCTTTCAGAACGTTCTCTTCTGAAGCAGTAATAACCGAGTGGCTACATTCAGTTCCCCGTCTGATAACAGACAATGAATCAAGCATCCAAGACGAATGTGAGAACGCTTTTCAAGAACTTGTTTTGGACCGGATATCTAAAGCTGCATCTGCTTCTTCTTCATATACTGTATCTTCTCATAGAAAGATGAAAGGAAAATTTATAGACAATGAGATGGAGATGCTTTTTCCCGACGGAATTCTGTATCTCCTAAGAGAGGTTTGCAACGGGGAGGTGAGCCCTTGGGTAAAGAAAATTTGCACAAATCTGGGCAAAAAGAAACGGATGAATAAGAAAATTGTTATTGCACTGCAAAATATAATCAGGGAATCGGAATCTATCTGGCTGAGTCATTCCATGCCCATTGAAAAGTGGACTGCTCCGCCAGGTGCTTGGTTTCTTTTGTCAGAGGTGTCAACATTCCTTTCAAAAGCAGTAGACTGGGGTTTTCTTCATCATCATTGGCAGCTTCTCGATAAACATGAAGTGGAAGTTGAGTTCAAAAGCCCAATTGCACAAAAAGAATCATCTGAAGAAGAAAGCACAGAATGCAATACTGTTGCCTGGGCTAGCGACCGAGTTTTTCTCTTACAAACAATTTCTAATGTTTCTGTGGAGCTGCCCCCTGAACCCGCAGCTGATTTAGCTCATAACTTGCTCAAACGAGTTCAAGCATTCAACATGCATTCGACGGAGGTTGACGCTCATTTAAAAGCACTAAAAACATTATGCAAGCGGAAAGCTTCAAATCTCGAAGAGGCAGAATCATTAATCTTGAAATGGATCGACCAAGTTCTCGCCAGGTCTTCTGGAATAATAGAAAAATTCATTTCAGATAATTCAGAAAAAAATGCGGAAGGAAGCTTCTTCACTCCTCCCAGAAGTGGGACTAGGAAAGGCAGGAAATCGGTAGCAATTTCCAAGGCATTGTCAAAAGCAGTTACAGCGATTTATACAGTTGGGTCTCTGGCTATTGTTTGCCCATCGGCTGATATGAGCAATGTAGTTCCCCTATTGCATACCATCATTACTTCTGGGAGTTCTGGTCCTAAATTAAATAACCTACCTGGCCCTTCAACTTCTTTACAACATGAAGCTCCTTCTTTTTATATTCAAGGGTGGCTTGCCATGGGCAAGCTTTGCCTCGCTGATGGGAAGCTAGCCAAGAATTATATTCCTCTGTTTGTACAGGAGCTTGAAAAGAGCGAATCTGCAGCACTTCGCAACAACATTGTGGTCATGATGGCAGATTTTTGTGTCCGGTACACCGCACTTGTTGATTGTTACATAACAAAGATCACAAGGTGCCTCTTAGATCCTTGTGAACTCGTGAGAAGGCAAACATTCATATTGCTATCCAGATTATTGCAGAGGGACTATGTGAAATGGAGAGGAGTGCTATTTCTTCGGTTCCTTTTGTCACTTGTTGACGAATCAGAAAAGATAAGACAGCTAGCGGATTTTCTTTTTGGAAATATTTTGAAAGTCAAGTCTCCACTTTTAGCATACAATAGTTTTGTTGAGGCTGTCTTTGTACTGAACGATTGCCATGCCCATAATGGACATCGTGAGTCACATGGGTCGCGAAAGGAAAGTCAAAGTTTTTCCATCAGGGGTACTGATGAAGAGCCAAGGTCCAAAAGGATGCACATTTATGTCTCTTTACTGAAACAAATGGCTCCGGAGCATCTTCTAGCAACATTTGCCAAGTTATGTGCAGAAATTCTAGCTGCAGCTTCTGATGGTATGCTCAATATAGAAGATGCAACTGCACAGTCTGTTCTAGAGGATGCTTTTCGAATTCTTGGCTGTAAAGAGATACGCATTCCTTCTACTCGAGCATCATCAGAGTCAGCAGACATAGAGGAAGAAGGAGACAATGGATCTGCAGCTAGAGGAAAGGCCGTAACTCAGGCAGTCAAGAAGAGCCTTATCCAAAATACAGTCCCCATCTTCATAGAATTAAAACGTCTATTGGAAACCAAGAATAGTCCCCTGATAGGGTCTCTCATGGAGTGCCTCCGGATTATTCTAAAGGACTACAAGAATGAGATTGATGACATATTGGTTGCTGATAAGCAGCTGCAGAAAGAGCTTATTTATGATATTCAAAAATATGAAGCTGCAAAAGCTAAAGCAACAGTTGCTGAATCTGTGGTTGGAACCAAGCCAAAATCAGGTTCAAATCAATCACCTGGTGTTTCTAAGAGCCTGACAAAGACACAAGGAAAAGCAGTTGGACAAAGTATGTCAAGTGACAAGCTTCCAAGTGATTCAAGAGTCGCTTCAGCAATGGCAGATGCTGCAGCTGCAGCAACAGCTCGTTCTGTGCTCAGGGAAATAAACAAGGGAACGGGTACACCACCTCTTCGTTCTTGTAGTGTTCCTAAAGTCAAGTCTCCTACTGGTATGTTTAATTTCAAAGATGTGAATCGCAGGGATGCCATAGAATCTGTAAAGAAAAAACAGTCTTTCGATTCTGATGAAGAAAACTAA 3981 0.4569 MEMEETVARVISEIEEFRGSHEQPPLSEQTLRDLQILLNNSLSESLYDELPSKNLSPSALIAPIASAMDSSPSHHSLLASDVFLSLLLAPNAPVFTLFTPISFLSFLRSLRRSCKAHSNPGPAQETSQNRKRKRAGRIRAKNPQNDNDSTDTSSQHDPKLLLRVLEKLVRVMDFIHLDRFPETLRSLVQTIAEIPVTALDACGNAAQYSKLLNLCSRVLREVLKPEHGESSNSAAEVLKSLCPLVLMAKSQARSFALEFVTSLGDRCDGVKKALVNFPRYLVKKAPERAEPRALAVDSIIEVVRAVKVEDQIAFVKYVVQMTQGKANLRLLAVDLILNLMTSLKDPLGVESEGSEAWGMWCLEALMKRCSDVSGGIRARALSSLAQLVGLLSRGERTSVVLKEFLGFGNVGGENAEGTMNDMLRRRCMDDKAAVRKAALLLVTNLTSLLGGAIDEVVLKTMGMACSDPLISMRKAAIAALSQAFRTFSSEAVITEWLHSVPRLITDNESSIQDECENAFQELVLDRISKAASASSSYTVSSHRKMKGKFIDNEMEMLFPDGILYLLREVCNGEVSPWVKKICTNLGKKKRMNKKIVIALQNIIRESESIWLSHSMPIEKWTAPPGAWFLLSEVSTFLSKAVDWGFLHHHWQLLDKHEVEVEFKSPIAQKESSEEESTECNTVAWASDRVFLLQTISNVSVELPPEPAADLAHNLLKRVQAFNMHSTEVDAHLKALKTLCKRKASNLEEAESLILKWIDQVLARSSGIIEKFISDNSEKNAEGSFFTPPRSGTRKGRKSVAISKALSKAVTAIYTVGSLAIVCPSADMSNVVPLLHTIITSGSSGPKLNNLPGPSTSLQHEAPSFYIQGWLAMGKLCLADGKLAKNYIPLFVQELEKSESAALRNNIVVMMADFCVRYTALVDCYITKITRCLLDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKSPLLAYNSFVEAVFVLNDCHAHNGHRESHGSRKESQSFSIRGTDEEPRSKRMHIYVSLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDATAQSVLEDAFRILGCKEIRIPSTRASSESADIEEEGDNGSAARGKAVTQAVKKSLIQNTVPIFIELKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADKQLQKELIYDIQKYEAAKAKATVAESVVGTKPKSGSNQSPGVSKSLTKTQGKAVGQSMSSDKLPSDSRVASAMADAAAAATARSVLREINKGTGTPPLRSCSVPKVKSPTGMFNFKDVNRRDAIESVKKKQSFDSDEEN* 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0129 1326 Pfam non-SMC mitotic condensation complex subunit 1 902 1079 IPR032682 -
Vra5g0129 1326 SUPERFAMILY ARM repeat 314 1177 IPR016024 -
Vra5g0129 1326 Coils Coil 732 752 - -
Vra5g0129 1326 PANTHER CONDENSIN-2 COMPLEX SUBUNIT D3 4 1299 - -
Vra5g0129 1326 Coils Coil 1173 1193 - -
Vra5g0129 1326 MobiDBLite consensus disorder prediction 115 156 - -
Vra5g0129 1326 MobiDBLite consensus disorder prediction 1213 1252 - -
Vra5g0129 1326 MobiDBLite consensus disorder prediction 1216 1252 - -
Vra5g0129 1326 MobiDBLite consensus disorder prediction 142 156 - -
Vra5g0129 1326 PANTHER CONDENSIN 4 1299 IPR026971 GO:0007076
Vra5g0129 1326 MobiDBLite consensus disorder prediction 1108 1127 - -
Vra5g0129 1326 Gene3D - 360 532 IPR011989 -
Vra5g0129 1326 MobiDBLite consensus disorder prediction 1016 1037 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0129 K11491 - gmx:100781242 2127.06