Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0120 ATGCACAGACACAACCATTCTCAAAAACAACCTACTTTATTCTTCTGCAAAACATCATATGGAAGACCTCAGTTTCTTTTTCGGAGTCATAGACCAACATTTTGGAAAATAACGAAGCACGGATCCACTGAAGATTTCTCAAGCCTTCCATACATTTGCACATTGCTTAACTGTTCTCTGTGGACTTACTATGGAATCATAAAATCTGGAGAGTACTTAGTGGCAACTGTTAATGGTTTTGGCATCTTGGTGGAGACAATCTATATCATTCTATTTCTCATATATGCACCAAAAGGGATTAGGGCTAGAACTGCTATTCTGGCTGTGATTTTGGATGTGGTGATCTTTGCAGCAGCAGTGACTACAACCCTTTTAGCTTTGCAAGGAGATTCTCGAAGTAGTGCAGTTGGTACTATGGGAGCAGGTTTGAACATTGTTATGTATTCTTCACCTCTTTCTGTGATGAAAACAGTAGTTACTACAAAAAGTGTGGAATATATGCCATTCTGGCTTTCATTTTTCTTCTTCCTAAACGGTGGCGTTTGGTTGTTGTATGCTGTTCTTGTTCATGATGTTATCCTCGGGGTGCCAAATGGTTCTGGATTTTTGCTGGGGACGATACAACTGGTGCTATATGCAATCTACAGAAATGGTGGAAAAGAAGCTTCAAAGAACAGATTGGAAGAAGGGTTGCAACATGAACCATTGATCTCACAGCACAGGGCCACCTAG 732 0.4044 MHRHNHSQKQPTLFFCKTSYGRPQFLFRSHRPTFWKITKHGSTEDFSSLPYICTLLNCSLWTYYGIIKSGEYLVATVNGFGILVETIYIILFLIYAPKGIRARTAILAVILDVVIFAAAVTTTLLALQGDSRSSAVGTMGAGLNIVMYSSPLSVMKTVVTTKSVEYMPFWLSFFFFLNGGVWLLYAVLVHDVILGVPNGSGFLLGTIQLVLYAIYRNGGKEASKNRLEEGLQHEPLISQHRAT* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0120 243 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET17 26 225 - -
Vra5g0120 243 PANTHER RAG1-ACTIVATING PROTEIN 1 26 225 - -
Vra5g0120 243 Gene3D - 25 98 - -
Vra5g0120 243 Gene3D - 134 228 - -
Vra5g0120 243 Pfam Sugar efflux transporter for intercellular exchange 135 217 IPR004316 GO:0016021
Vra5g0120 243 Pfam Sugar efflux transporter for intercellular exchange 27 98 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0120 Vra-Chr5 1002643 1004964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0120 26 234 Miscellaneous Gene Families AT4G15920 59.048 2.60e-84 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0120 K15382 - gmx:100808537 347.821