Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0119 ATGAGTGAAGAAGCGAAAAAGAGCATTGCCGGACCTCTAACGGTGAGGCCCAACACCGATGACCGGAAACCGTCATCGTTACCGGCCGTCCCTCTGAAGAAGGTCATCATCAAGAGCGCCGACATGATTCCCGACATGCAGAAGGAGGCCGTTGATATCGCTGTTGCCGCCTTTGAGAAGTACAATGTAGAGAAAGATGTTGCGGAGCAGGTAAAGAAGGAGTTCGATAAGAGGCACGGCCCCACTTGGCATTGCATCGTTGGTCGTAATTTTGGCTCATATGTGACTCATGAAACAAACCACTTTGTTTATTTCTATTTGGATCAGAAAGCGGTTTTACTTTTTAAGTCTGGATAG 357 0.4762 MSEEAKKSIAGPLTVRPNTDDRKPSSLPAVPLKKVIIKSADMIPDMQKEAVDIAVAAFEKYNVEKDVAEQVKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0119 118 ProSitePatterns Dynein light chain type 1 signature. 84 98 IPR019763 GO:0005875|GO:0007017
Vra5g0119 118 PANTHER DYNEIN LIGHT CHAIN 5 118 - -
Vra5g0119 118 MobiDBLite consensus disorder prediction 1 27 - -
Vra5g0119 118 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 32 118 IPR037177 GO:0007017|GO:0030286
Vra5g0119 118 PANTHER DYNEIN LIGHT CHAIN 5 118 IPR001372 GO:0007017|GO:0030286
Vra5g0119 118 SMART Dynein_light_2 30 117 IPR001372 GO:0007017|GO:0030286
Vra5g0119 118 SUPERFAMILY DLC 32 118 IPR037177 GO:0007017|GO:0030286
Vra5g0119 118 Pfam Dynein light chain type 1 34 117 IPR001372 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0119 Vra-Chr5 984339 989217 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0119 K10418 - gmx:100305908 221.476