Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra5g0117 | ATGCTGGGTCTGAGTGTAGTGTTAGAAGCACAGAAAGGTAATAATGCTAGCAAGAAAACTCCACAAGTGATTAGCAAAACGACGGTGCTTAGCAGTATGAACAAACACTCTCCTTCTGCAGTGAACGCTTCTCAGCACTCTCCATTTCAGGAACCAACGTTTCTACATCAATGTTTTCTCTGCAGAAAGAGACTCTTACCTGGGAAAGACATCTACATGTACAAAGGGGACAGGGCCTTCTGCAGCGTGGAGTGCAGGTGCAAACAGATTTTCATGGATGAGGAAGAGAGTTTTGAGAAAGACAAGTTTTTTTTGACTGCCATGAGTCCCACATCGTCTGCTTCTTCTTCCTCACAAGCACGTAGTCATGAGAAGGGAGGAAGAATTTGA | 390 | 0.4436 | MLGLSVVLEAQKGNNASKKTPQVISKTTVLSSMNKHSPSAVNASQHSPFQEPTFLHQCFLCRKRLLPGKDIYMYKGDRAFCSVECRCKQIFMDEEESFEKDKFFLTAMSPTSSASSSSQARSHEKGGRI* | 130 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra5g0117 | 129 | MobiDBLite | consensus disorder prediction | 108 | 122 | - | - | |
| Vra5g0117 | 129 | PANTHER | FCS-LIKE ZINC FINGER 15 | 1 | 125 | - | - | |
| Vra5g0117 | 129 | Pfam | zinc-finger of the FCS-type, C2-C2 | 45 | 95 | IPR007650 | - | |
| Vra5g0117 | 129 | PANTHER | FCS-LIKE ZINC FINGER 5 | 1 | 125 | - | - | |
| Vra5g0117 | 129 | MobiDBLite | consensus disorder prediction | 108 | 129 | - | - | |
| Vra5g0117 | 129 | ProSiteProfiles | Zinc finger FLZ-type profile. | 53 | 97 | IPR007650 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra5g0117 | Vra-Chr5 | 975300 | 976306 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra5g0117 | - | - | gmx:102670271 | 143.665 |