Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0115 ATGAGATTCTCTCAGCAAATGGAGATACTAGCACGCACACTCATTGTCCTTTCACTCTGCGCTCTCTCTTTCTTCTCAGTTTATTGTTCTCAATATCTTACTTCAGATAGATCACAACTTCCCCTGTTCGCTTTTAGTTGGTGGGGTGACAAGGGCACATTCCAGGCCGGTGACACAGCAACCATCAAAGTAAAAGTGCTTGAGAATGCTGATAAGATTGACAAAAAAGTTTTCAATCCCACACTAACTGTGAATGGAAAGGAAGGGAACAGTTCCTATGTGTCTACTGTGTTGTCAGATTTTGAAGGAGATCCAAATGAATGGAAGATCTTCTTTACCCCTATCAGGGTTGGATTGTTTAATGTACTCATCAGTGAGGAGCGTTATAAAGTTGATGATTCATCTTTGCATTTCCAAGTTGAACCAGGGAACATGTACCCTTCTGTGTGCGTTGCATCATGGAAGGGCGTGAGACATGAGTATGAAGCTGGTTCAAAAGCTACGCTTATGGTGCTACTTAAAGATGCATTTGGGAACGGTATCTCTAAGACGACTCAAGTGTCCTATTTGCCTGATTTCAAGCTGTCTGTTTTGCATGAAAATGGTTCTGTTGCAAGTGCTCCAGATATCTTTAACATGGGGTGGACTGAGTTTGATTATATAGTCATTGAGTTTATTGTGACGAAAGCTGGAAAGTTCTCATTGAGCTTAGAAGGAGGAAATCAAACCTTGGAGGGTTCTCCATTACCATTGAAGGTGAATCCAGGAGCTATAGATGTCTCTAACTGTATCGCCAAATGGAACGTTGAATCTCGTGCATGGCAATTGTCTTCCAAGATGGAAATCTTTATACATCAGTTAGATAAATACGGAAATCTGGTTTCTGGACTGTATCCTTTTGATTCTGAAGTTGTTGAAACTGACACAAACTTGTCGATACCGATATCAGATCTCCATTTTCAAGAAGTGGATGCTGGAATTCAGTTGTTTTCGTTTAGCAATTTTGAGCCAGGGAACTTCCTATTGACAATATATGATTCCAAGCATAATAAAAGCATTTCCAACATGCCATATGTTTATACTGTTTTTATAGGTTACTGCGATGGGGTTAAAAGTGTTGTTAATGGATCAGGTTTAAATGATTCAGTAGCTGGTGTAAAGGAAGAATTTTCTGTGTATTTGAATGACATCTATCAATATCCTTCCCCTGTCCAAGCAAACATACTTCAAGTACAAATTTCAATAGAAAATGACTCGTACAGAGTTATGCCAGTCATATATCCTGTGGTTGACAGTAATGGGAGCAGAATAGCTTCAGGATTGAGATATGATGGTATCGGTCACATGGAAACTCTGCCATCATCTTCAATAGTGTTGAGAAACAATTCTAATGGGAGTGGGAGCTTTATCATGGCAAGTGATTTTCGTGTGGATTACATACCAGAAAAAAGTGGATTTTATGATATTAATGTATATTGTGGAAACATATTATTGAATGAGGGACATTCTTTCCGAAAAGAGGTAAAAGCAGGTGAAGTAAATGTTTCCTTGTCAAGTGTCATGAGGTTTTCTCCAAAGGTGCCAAAGCTGTCCAAAAGTGAAATAATTGTCCAGCTTGTGGATTCATATTTAAACCCTGTCCTCTCACAACAATCTAGGTTGAAATTGGAGATTGCTTCTGTTAATAGTTCTGGCTTTTCGAGTTTGGACATTACAGACAATAAGGATGGATCATACAGCTGCAGTTACATGGCCAAAGATGTTGGCACTTACAAGATTTGTGCTTCCTTTGATGGCAAAAGTTTCTTATCATGTCCCTTGAGTATCAATGTGTACAGCAGTGAATATTTTCCAAAAGCCAACAATGATACAATATCTATTTGGGAGGACCAATCCGTTGCCTTTGATGTCTTAGCAAATGATTATTTTGCTGGTGATAATGCAAGTATAGTTGAATTCTCAAAATCAGATCATGGTTCACTTATACAGAATGGAAGGATCTTTCGTTACACTCCTTATAAAGGGTATTATGGAAATGATTCCTTTTGGTATACAATTTCTGATATAAATGGAAATCTTGCTTCTGCTTCCGTGTGCATATTTGTTCTCAATGTTCCACCTCAGTTTGTTTCTGCTCCAAATCAACTGCAAGCAACAGAAGATTCAATAAGCCCTAGATTTGGTGGTTTCACCGGGTTTGAGATAACTTATTCAAATCCTATGGAAAATATTTCTGTCAATCTTAGTGCTCAATCTGGCATTGTACTTCTGTCTCCTATGGCTATGCAATTTGGGCAAGTAATGTGGAGTGAACTTACTGTTGACACAGGAAATGAAACTGCAACCAGTTTAATAATAGAAGGCTCTGTGGAAGTAATTAATTTTGCGCTTCAGTCAATTCAATATCTGGGAAATGAAAATTTTTATGGAGGAGATACCATTCAAGTCTCAACCAGGAACAAGAACGGAGTAAATTCACTGGATGTTCCAATTTCTGTTGATCCTATCAATGACCCTCCATTTATTAAAGCCCCCTACTTCATCATATTGAGGAGTAATGAAGATGAGACCCTTATCTTTGACCAAGAGAAAGATAAGTTTGACTTTTTCATTGGAGATCCTGATCTTCTTACCTTCCCTGGTGGTCAGGCTCACTTTTTTGTGACGTTCTCCATGGAAGTAAATGATGGATGGTTGGTGACAAACCTACCAATTCATTTGATCAATACAACTGAATTGAAGCACGGAATTAATTATCAGTGGCAGCCTCTTCAGACATATGTTACTATCTCACAGCACTTTATGGTCAAAGCTCATGGAATCAGATTTCAGGCCACAGTCAATGACTGCAATAGTGTTATGCAGCAACTGTTCTATCATGGAGGTGAGCATGGAGCTGTTTTAACAATGACATTAAATGACATGGGAAACTACGGATGTTTTCCAGATTGTGCAGATGGCATGTCAATGCCATTATACACAGAAGCTACTGTAAATTTAATGAGAAAACAACCAATGAGTTCATTTCTGGCTCACACTTTAGGATCAATCATTGTCATTGAATTTGTTATCATATTCTCTCTTGGAGCCTTGCTTCTTTACTTCACCTGTAAATGTGCAATTCTTCTTGCACATGAAAGAAGAAACAGAGAAGAAAGTTCTTCAGAGTTATCTAATTCCAAGAGTTTCCCCAGAGAAACTGTAAGTGTGCATATATAG 3219 0.383 MRFSQQMEILARTLIVLSLCALSFFSVYCSQYLTSDRSQLPLFAFSWWGDKGTFQAGDTATIKVKVLENADKIDKKVFNPTLTVNGKEGNSSYVSTVLSDFEGDPNEWKIFFTPIRVGLFNVLISEERYKVDDSSLHFQVEPGNMYPSVCVASWKGVRHEYEAGSKATLMVLLKDAFGNGISKTTQVSYLPDFKLSVLHENGSVASAPDIFNMGWTEFDYIVIEFIVTKAGKFSLSLEGGNQTLEGSPLPLKVNPGAIDVSNCIAKWNVESRAWQLSSKMEIFIHQLDKYGNLVSGLYPFDSEVVETDTNLSIPISDLHFQEVDAGIQLFSFSNFEPGNFLLTIYDSKHNKSISNMPYVYTVFIGYCDGVKSVVNGSGLNDSVAGVKEEFSVYLNDIYQYPSPVQANILQVQISIENDSYRVMPVIYPVVDSNGSRIASGLRYDGIGHMETLPSSSIVLRNNSNGSGSFIMASDFRVDYIPEKSGFYDINVYCGNILLNEGHSFRKEVKAGEVNVSLSSVMRFSPKVPKLSKSEIIVQLVDSYLNPVLSQQSRLKLEIASVNSSGFSSLDITDNKDGSYSCSYMAKDVGTYKICASFDGKSFLSCPLSINVYSSEYFPKANNDTISIWEDQSVAFDVLANDYFAGDNASIVEFSKSDHGSLIQNGRIFRYTPYKGYYGNDSFWYTISDINGNLASASVCIFVLNVPPQFVSAPNQLQATEDSISPRFGGFTGFEITYSNPMENISVNLSAQSGIVLLSPMAMQFGQVMWSELTVDTGNETATSLIIEGSVEVINFALQSIQYLGNENFYGGDTIQVSTRNKNGVNSLDVPISVDPINDPPFIKAPYFIILRSNEDETLIFDQEKDKFDFFIGDPDLLTFPGGQAHFFVTFSMEVNDGWLVTNLPIHLINTTELKHGINYQWQPLQTYVTISQHFMVKAHGIRFQATVNDCNSVMQQLFYHGGEHGAVLTMTLNDMGNYGCFPDCADGMSMPLYTEATVNLMRKQPMSSFLAHTLGSIIVIEFVIIFSLGALLLYFTCKCAILLAHERRNREESSSELSNSKSFPRETVSVHI* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0115 1072 PANTHER JITTERBUG, ISOFORM N 192 1007 IPR044801 GO:0030036|GO:0051015
Vra5g0115 1072 PANTHER JITTERBUG, ISOFORM N 35 144 IPR044801 GO:0030036|GO:0051015
Vra5g0115 1072 ProSiteProfiles Filamin/ABP280 repeat profile. 364 508 IPR017868 -
Vra5g0115 1072 Gene3D - 617 699 - -
Vra5g0115 1072 SUPERFAMILY E set domains 533 614 IPR014756 -
Vra5g0115 1072 Gene3D Immunoglobulins 144 260 IPR013783 -
Vra5g0115 1072 Pfam Filamin/ABP280 repeat 529 607 IPR017868 -
Vra5g0115 1072 Pfam Filamin/ABP280 repeat 366 495 IPR017868 -
Vra5g0115 1072 PANTHER JITTERBUG, ISOFORM N 192 1007 - -
Vra5g0115 1072 PANTHER JITTERBUG, ISOFORM N 35 144 - -
Vra5g0115 1072 Pfam Bacterial Ig domain 608 691 - -
Vra5g0115 1072 Gene3D Immunoglobulins 360 518 IPR013783 -
Vra5g0115 1072 SUPERFAMILY E set domains 146 263 IPR014756 -
Vra5g0115 1072 MobiDBLite consensus disorder prediction 1053 1072 - -
Vra5g0115 1072 Gene3D Immunoglobulins 530 616 IPR013783 -
Vra5g0115 1072 ProSiteProfiles Filamin/ABP280 repeat profile. 540 611 IPR017868 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0115 - - ccaj:109808168 1890.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0115 5 942479 949378 Vra5g0115 5 942479 949378 ECH