LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra5g0112	ATGACTAAGAGTACCTTGGAACCCGGGGGGAGCGGAGGCGGTGGCTTCCACGCGGTTCACGCGGAGCGTGACCTAGAATCTAATTGGGAAGTTGACCTCGCCAAAAAACTCGAGGAGTATCTGCTGAAAATTTGTTCAGGCGAGATCACCGGCGAGGAAGAAGGACATATTCCTGTGAACTTTGCCGAAGCTGCTCTACTGCTTCAGGGTTCCATACAGGTCTATAGTCGAAAGGTGGAGTACCTCTACACCTTGGTCTTGCGTGCTTTGGAGTTCCTTTCCCAGAAAAGACAGCAAGATCATGAAGATGGGGAATCGGTCCAACCTGAAGAAATGGGTTCCCGTGCTGTTTCTGATGAGGAAAATGATCAATTCTGGGGCTTAGATGACATCCAAGTTGAAGAAAAGAATTCCTTGGATGGCACAACAGGCAAAGAAGTAAATTTGGATCTCTTTATAAAACCTCCTGCAAATCTAGTTGTTCTTGAAGGTGACTGCTTGGATGCTGGTGGTGATGGAGGAGAATTGGAGTCTTTTCTGTTGTCCACCACAGACCTGTACCAGGACTTCATCTTATTGGACACATCCGATGCTGTTGCAGTTCATGAGTTTTTGGAGGGTACCAAAGCTGCCAAAACTCGAAATGATGCTAGTAGAAGAACCCCAGGTCGTAAAAGCTTTCTTTCTCCTAGACGTTCTGGTGGAAGTGCTCGTAGATTATCTGCTGCTAAGAGTCAGTGTGCGAATTCCAACTGCTCCCCTAAACTTAATAGTGGTTTTGATGATGAAAACGTCCGGCCCAGTTTTCCTGTCTCTGATGGTCCTGATGACTGCAATTATGGATTTGATATGGGTCAGGGATGTGAGGCATCTAGGGATTCAGACAATTCTGATGACGATAATGATGATCCATGGAAACCTCTAAATCCTCATGAACAGGGCAACTTGAGGGTGAAGCCATTCAAAAAAGTGAAAATTTTAAAAAAGATTAACATTAATGCGAGACAACCAGTTCCTATGAGCTCCTTGTTTCCACTTGCAAAATTGCATGGCCCTATCAGTCCAGAGCTCGTGGAACTGTGGGAGAGGCAAAATAATGCCCATGAAAGACAAAGGGATTTTCAAGCTCCATTCTATGAGAAGCTGAGGCAATCTCTTGTTAACGAGGGGAATGAAACTGGTGTAACATTTAACACTGAAGGGGACAATGATGACATTGAACATGACAGTGGAATTCCTGATTTTGATATGCCAGACAATGCTTTCATGGAAGAAAATCTACCACCTTTCAATAACGAGCCTGAGTTTGATGATGCTGATGTCAATGTTGATGAAGCCGTAGATCTTTCTCAGGCAAGTTTGGAAGACCTTTGCCGCTCTCATCTGAATGCTCTCCTAGCAAGCATTGCTGAAACTGAGAAGCAGACTGAAATGGCTGCTAGGGTTTCAACGTGGAAACAAAGAATTGAACATAATTTGGAAGAACAGGAATCACATCCGCCATTTGATATCCAAGATTATGGTGAGAGAATTCTTGACAAGTTCTCTCTGCTCTCCCTTGAAGCAAGCAGTAGCCGAGTCCTGTCCTTTTCTGATTTGGTCAAGGATCAGGAAAAGTATGACGTGGCCCGAAGTTTTTCTTCCCTTCTTCAACTGGTAAACAATGGAGAAGTAGCTCTAGAAAGAAATGGAATTGACGGGAAGTCTGTCTGCTACACATCTGTTAATCCCTTTCATGTTAAGCTCCTTAAGCATGGTAAGGAACGGGAGGATGCACAGTTTGCTTTGCCAAAAAAGAGAGCAAAGTCTCCTAAAAAACCCTCTACAAAAGGTGATAAGAACAAAACTGAAAGAGAAAAGTCATCAACGAAAAATCATTCTACAAAAGCTCATAAGAACAAATTTGAAAGAGAAAAATCTCCCACATCTAGGAGAAATGGATCTACTGGTGTGTCACCACCAACAAATTGTAAACTTTCTGTAAAGCTTGGAAAGGTGAGTGCGATAAAGTTATCCCCTGAAGCCAAAAGAAGGCGTAGATCACACTATGTTGAACCAGTTAATTTACATTCAGCAGGGTGA	2082	0.4337	MTKSTLEPGGSGGGGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEITGEEEGHIPVNFAEAALLLQGSIQVYSRKVEYLYTLVLRALEFLSQKRQQDHEDGESVQPEEMGSRAVSDEENDQFWGLDDIQVEEKNSLDGTTGKEVNLDLFIKPPANLVVLEGDCLDAGGDGGELESFLLSTTDLYQDFILLDTSDAVAVHEFLEGTKAAKTRNDASRRTPGRKSFLSPRRSGGSARRLSAAKSQCANSNCSPKLNSGFDDENVRPSFPVSDGPDDCNYGFDMGQGCEASRDSDNSDDDNDDPWKPLNPHEQGNLRVKPFKKVKILKKININARQPVPMSSLFPLAKLHGPISPELVELWERQNNAHERQRDFQAPFYEKLRQSLVNEGNETGVTFNTEGDNDDIEHDSGIPDFDMPDNAFMEENLPPFNNEPEFDDADVNVDEAVDLSQASLEDLCRSHLNALLASIAETEKQTEMAARVSTWKQRIEHNLEEQESHPPFDIQDYGERILDKFSLLSLEASSSRVLSFSDLVKDQEKYDVARSFSSLLQLVNNGEVALERNGIDGKSVCYTSVNPFHVKLLKHGKEREDAQFALPKKRAKSPKKPSTKGDKNKTEREKSSTKNHSTKAHKNKFEREKSPTSRRNGSTGVSPPTNCKLSVKLGKVSAIKLSPEAKRRRRSHYVEPVNLHSAG*	694

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra5g0112	693	PANTHER	CONDENSIN-2 COMPLEX SUBUNIT H2	7	681	IPR031739	GO:0030261
	Vra5g0112	693	MobiDBLite	consensus disorder prediction	98	119	-	-
	Vra5g0112	693	MobiDBLite	consensus disorder prediction	212	317	-	-
	Vra5g0112	693	MobiDBLite	consensus disorder prediction	671	685	-	-
	Vra5g0112	693	Pfam	Condensin II complex subunit CAP-H2 or CNDH2, mid domain	154	300	IPR031719	-
	Vra5g0112	693	Pfam	Condensin II complex subunit CAP-H2 or CNDH2, C-term	304	591	IPR031737	-
	Vra5g0112	693	Gene3D	Structural maintenance of chromosome 1. Chain E	503	567	IPR023093	-
	Vra5g0112	693	MobiDBLite	consensus disorder prediction	98	118	-	-
	Vra5g0112	693	MobiDBLite	consensus disorder prediction	593	693	-	-
	Vra5g0112	693	MobiDBLite	consensus disorder prediction	607	643	-	-
	Vra5g0112	693	Pfam	Condensin II complex subunit CAP-H2 or CNDH2, N-terminal	17	131	IPR009378	-
	Vra5g0112	693	MobiDBLite	consensus disorder prediction	239	258	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra5g0112	K11490		-	gmx:100786571	1040.02

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra5g0112	5	922375	928542	Vra5g0112	5	922375	928542	ECH