Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0110 ATGGCGCGGAACACATCAGACCTTGTAGCGCAACTCGATGTTGCTAATCACTTTCCCTACGACTCTCTCCTCCGCTACTGCTCTTCCAACATTTCGGGTTTCCCTCAACCCGCTACTCAGTTCACCGTTTCGCAGTTTGGGCATGGACAATCCAACCCCACTTACTTGTTGGAAGCGGGTTCTCATGACTCCGTCGTGAAGCGCTATGTTCTCAGGAAGAAACCTGCTGGGAAATTGCTCGCTTCAGCTCATGCCGTTGAAAGAGAATTTCAGGTTCTCCAGGCATTGGGTGCTCATACCAAAGTTCCGGTTCCTAAGGTTTTCTGTTTGTGCAACGATCCAAGTGTTATTGGAACCGCGTTTTATATCATGGAATATTTGGAGGGACGCATATTTATTGACTCTAAGTTACCGGGTGTGCCACCTCAGAGGAGGAACGCAATTTACAGGGCAACTGCGAAAGCCTTAGCTTCCATACATTCTGCTAATGTGGACTCCATTGGTCTGGGAAAATATGGACAACGCAATAATTATTGCAAAAGACAGATTGAGAGGTGGGCTAAGCAATATGTTGCCTCAACCAGTGAGGGTAAACCTGCAAGTAATCCAAAAATGTTTACCTTGATTGATTGGCTACGACATCAAATCCCCTCTGAAGATTCTTCAGGAGCAACAGGTGGTCTGGTTCATGGAGATTTTCGCGTTGACAATCTTGTGTTCCATCCCACAGAGGATCGAGTAATTGGAATACTTGACTGGGAACTGTCTACCCTTGGTAACCAAATGTGTGATGTTGCATATAGCTGTATGACTTATATTGCAGATGTTGGGCCTGAAAACGTGCGTGAAGGTATGGAACGTTCTGGGCTACCTGAGGGGATTCCTTCACTACCAGAATATTTGGCTGAATACTGTTCCCTAGCAGAAAGAAAATGGCCTGTTGCTGAATGGAAGTTCTATATTGCCTTTTCTTTGTTCAGAGCCGCTTCAATTTATGCAGGAGTTTATAATAGATGGGTTAAGGGTAATGCATCAGGAGGTGAGCGTGCTCGATACACTGGAGTACTTGCTAATGGCCTTATAGATGCTGCTTGGGAATTTATTGGACAAAATTCCGTGCTTCCTCAGCATCCTCCCTCAGATGCAAATGTACGAGAATATTCAAAAGAGTTTGTGAATGGGAATGATGCACAGGGCCGCTCAAATCAGGGGAAGTTTGTTCCTAGTCAAAAGGTTTTGGAACTGAGGAAAAAATTAATTAAGTTCATGGAGGAACACATTTACCCCATGGAAAATGAATTTTATGAACTTGCCCAATCAGACTCACGCTGGACTGTTCACCCAGCAGAGGAAAAGTTAAAGGAGATGGCAAAGAAAGAAGGCTTGTGGAACTTATGGATTCCTCTTGATAGTGCAGTGAGAGCAAGAAGCCTTATCTTTGATGGGAGCAATAATCATCTCTCTTCCAATGCAAATGATTTGTTATCGGGGGCTGGTCTCACTAATCTCGAATACGGATACCTTTGTGAGATCATGGGTCGTTCCATTTGGGCTCCACAAATATTTAATTGTGGTGCACCTGACACAGGTAATATGGAGGTATTACTGCGTTATGGAAATAAAGAACAACTGCAAGAATGGCTAGTTCCTTTGCTTGAGGGGACAATTAGGTCTGGATTTGCTATGACGGAACCACAGGTTGCATCTTCTGATGCAACCAATATTGAGTGTTCTATTAAAAGGCAAGGAGATTCATATATTATCAATGGGACAAAATGGTGGACAAGTGGTGCTATGGATCCAAGATGTAGAATTCTTATAGTCATGGGGAAAACTGACTTCAACGCAGCAAAGCATAAACAACAATCGATGATCTTAGTGGATGTCCAGACTCCTGGTGTTCACATAAAGAGACCATTGACGGTGTTTGGCTTTGATGATGCTCCTCATGGGCATGCTGAAATAACTTTTGAAAATGTTTGTGTGCCAGCGAGAAACATCATACTGGGTGAAGGACGGGGATTTGAGATTGCTCAGGGTAGGCTGGGTCCTGGAAGGCTGCACCATTGTATGAGACTTATAGGTGTTGCTGAGCGCGGCATGCAGTTGATGGTTCAAAGAGCCATCAGTAGAAAAACATTTGGAAAGTACATTGCTCAACATGGTTCATTTCTTTCAGATATGGCCAAGTGCCGAATAGAGGTAGAGAGGACCAGATTGTTAGTGTTGGAAGCCGCTGACCAACTTGATAGGCTTGGGAACAAAAATGCTCGGGGGATACTAGCAATGGCAAAGGTAGCTGCACCGAACATGGCACTGAAGGTGCTTGACATGGCAATGCAAGTGCATGGAGCAGCTGGTGTTTCATCTGAAACCGTTCTGGCTCATCTCTGGGCAGCTTCAAGGACACTGAGAATCGCTGATGGTCCAGATGAAGTTCACTTGGGGACCATTGCCAAGCTAGAACTGCAGAAAGCCAAGCTTTGA 2487 0.4471 MARNTSDLVAQLDVANHFPYDSLLRYCSSNISGFPQPATQFTVSQFGHGQSNPTYLLEAGSHDSVVKRYVLRKKPAGKLLASAHAVEREFQVLQALGAHTKVPVPKVFCLCNDPSVIGTAFYIMEYLEGRIFIDSKLPGVPPQRRNAIYRATAKALASIHSANVDSIGLGKYGQRNNYCKRQIERWAKQYVASTSEGKPASNPKMFTLIDWLRHQIPSEDSSGATGGLVHGDFRVDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYSCMTYIADVGPENVREGMERSGLPEGIPSLPEYLAEYCSLAERKWPVAEWKFYIAFSLFRAASIYAGVYNRWVKGNASGGERARYTGVLANGLIDAAWEFIGQNSVLPQHPPSDANVREYSKEFVNGNDAQGRSNQGKFVPSQKVLELRKKLIKFMEEHIYPMENEFYELAQSDSRWTVHPAEEKLKEMAKKEGLWNLWIPLDSAVRARSLIFDGSNNHLSSNANDLLSGAGLTNLEYGYLCEIMGRSIWAPQIFNCGAPDTGNMEVLLRYGNKEQLQEWLVPLLEGTIRSGFAMTEPQVASSDATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRILIVMGKTDFNAAKHKQQSMILVDVQTPGVHIKRPLTVFGFDDAPHGHAEITFENVCVPARNIILGEGRGFEIAQGRLGPGRLHHCMRLIGVAERGMQLMVQRAISRKTFGKYIAQHGSFLSDMAKCRIEVERTRLLVLEAADQLDRLGNKNARGILAMAKVAAPNMALKVLDMAMQVHGAAGVSSETVLAHLWAASRTLRIADGPDEVHLGTIAKLELQKAKL* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0110 828 CDD ACAD10_11_N-like 42 308 IPR041726 -
Vra5g0110 828 Gene3D Phosphorylase Kinase; domain 1 20 128 - -
Vra5g0110 828 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 670 824 IPR036250 GO:0016627
Vra5g0110 828 Gene3D - 558 672 IPR046373 GO:0016627
Vra5g0110 828 Pfam Acyl-CoA dehydrogenase, N-terminal domain 414 554 IPR013786 GO:0016627|GO:0050660
Vra5g0110 828 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 1 828 - -
Vra5g0110 828 Gene3D - 407 556 IPR037069 GO:0016627|GO:0050660
Vra5g0110 828 Gene3D - 129 372 - -
Vra5g0110 828 Gene3D - 673 827 - -
Vra5g0110 828 PANTHER ACYL-COA DEHYDROGENASE IBR3-RELATED 1 828 - -
Vra5g0110 828 Pfam Acyl-CoA dehydrogenase, C-terminal domain 672 820 IPR009075 GO:0016627
Vra5g0110 828 SUPERFAMILY Protein kinase-like (PK-like) 39 343 IPR011009 -
Vra5g0110 828 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 406 685 IPR009100 GO:0016627
Vra5g0110 828 Pfam Phosphotransferase enzyme family 43 289 IPR002575 -
Vra5g0110 828 Pfam Acyl-CoA dehydrogenase, middle domain 559 660 IPR006091 GO:0016627
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0110 1 826 Acyl Lipid Metabolism Gene Families AT3G06810 75.181 0.0 1317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0110 K00249 - gmx:100788184 1518.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0110 5 909874 917539 Vra5g0110 5 909874 917539 ECH