Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0075 ATGCTACGTCAATGGCAGTTAGGGTTTCCTGTTGATTCCCCAAAGCTCGATCACCTCGCTATATTGCTGCCTACGATGGGTGCTCCGGAGAAATCGCAGACAAACGCTAATTCGATGCAGCGTGTCAAGGTCTATCGTCTGAATGGTGATGGCAAATGGGATGACCAAGGCACTGGGCATGTCAGTGTTGATTATTTGGAGCGATCAGAAGATCTGGGCTTATATGTTTATGATGAAGAAGACAATGAAAACATACTTTTGCATCGCATCTCTCCTGATGATATTTACAGGAAACAAGAAGATACAATTATTTCATGGAGAGATCCAGAATATGCTACTGAACTTGCACTTAGCTTTCAAGTCCCTGGTGGTTGCTCTTACATATGGGACCATATTTGCAATGTGCAAAGGAATATGAATTTTAATACTTTAAATAGTGAGGCATTTCATAGTGGGAACAGTGAGTCAAGGGACTTGCCCACAGTTGAATTGTCAACGCTTCCATTGATTCTTAAGATGGTGGTTGAGAGTGACAATACAGATCAGTCACGGCTTGCAGAACTAATTTTAAGTGATCAAGATTTTTTTAGGAAACTTATAGAAGTATTCAGAGTTTGTGAAGAATTGGAAAATATGGATGGCCTTCACATGATTTTCAAAATAATCAAAGGGATCATTTTGCTTAACAGTACACAAATTTTTGAGCGTTTATTTAGTGATGAGTTAATGATGGACATTATTGGTACCCTTGAGTATGATCCAAAGGTTCCCCATGTTCAACATCATCGTAAATTCTTAAAGGACCATGTTATTTTTAAAGAGGCCTTACCTATAAGAAACTCAATTGTATTATCTAAGATACATCAGACATATAGAGTCGGTTTTTTGAAGGATGTTGTTTTGGCTAGAGTTTTGGATGAGGCTACTGTTGCTAATCTTAACTCCATAGTACATGCAAACAATGCCATTGTTGTTTCTTTATTGAAGGATGACAGCACATTTATCCAGGAATTGTTTGCTAGGTTAAAATCACCCACCACCTCTCCTGAATCAAAGAAAAATATGGTCCATTTCTTACATGAGTTTATTAGTTGTAGCAAGAGCTTACAGATGGTGCGGCAGCTTCGGCTCTTTCGAGATCTGATGAATGAGGGGATCTTTGACGTCATCTCTGATTTACTCTTGCAAAGTCAAGACAAGAAGCTTATGCTTACTGGGACAGATATCCTCATTCTCTTCTTGAATCAGGATCCTAATCTTCTGCGATCTTATGTTGTTCGAGAGGAGGGAATTACACTTCTTGGACTATTGGTTAAGGGCATGATAACAGATTTTGGGGATGACATGCATTGCCAATTTCTTGAGATTCTCCGCAGTCTATTAGACTCATGCTCATTGTCTGGAGCACAGAGGGATACTATTATCGATATTTTCTATGAGAAGCATCTAGGTCAACTGATTGATGTGATAACAGCGTCATGTCCTACGGAAAATGTTCATGTGAATAGCCAAATAAAGTGCCAGAGTGGGACAAAGCCAGAGATTCTATCAAACATATGTGAATTGCTATGCTTTTGTGTCCAACACCACCCATACAGGATAAAGTGTAACTTTCTTCTTAATAAAGTCACGGATAAAATTCTATTACTGTCACGGAGAAGAGAGAAATACCTTGTTGTTGGTGCTGTGCGGTTTGTTCGCGCTATTCTCTCACGCCATGATGAGCATCTTATAAATCATTTCGTTAGAAGTGATCTTCTGAAACCAATTGTAGATGCCTTTGTTGCTAATGGTAATCGCTACAATCTGCTCAATTCAGCTGTTCTTGAGCTTTTTGAGTATATTCGCAAGGAGAATATGAAATTATTGCTGAAGTATATAGTTGATTCTTTCTGGGACCAGTTAGTGAAATTTGAGTACTTGGTTTCCATTCATTCATTGAAAATAAAATATGAGCAGTATTTGGATAATGATGGGATAAAAGGGACTTCTATTATGAATGACATTCGAAGACGACTTGATGAGCGTGCTCCGGAGAAAGAAGAGGAAGACTACTTTAACGAGGACAGTGATGAGGAGGATACGGCGTCTGCATCCAATTCACATAATCAGAAAGTGAAACAACGGCAACATGCCTTATCCAATGGAGATGCTGAAAGCTACTCAAAGTTAAGTCCAAGATCCGGTGGGTTGGTTGACTATGATTATGATGAGGATGATGAAGACTACCGCCCACCACCAAGGAATAATCCAGAAGCATCTGAAGAGTATGAAGGAACAATGGAGTCTCTCAGGCTGAAAAGAAAATTGACAAAGGTCGAGATTTTACAGATGCCGAAGTTGTCTAAAACTTCAAAATCTAAAGATCGTGTTTTTGCTGCCTTATGTTCAACTTTGAGCCAGGCTGTGCTACCTCGTAAGAAACCTTTAGTCAACTTTATTACTATTCCTTGTATAGAGGACAATCAAGAAAAGGAGCAACATGTTTCTGGAAGCTGCTGTGAGAATAGTAGTGTATCGGCTGAGCTAAACCATTTAGAGAAAGAAACTGCTGCGTCTCGAAATTCTTCTGATAGGTTGTACGACACAGTTGACAATGGACAGTTGGATGGTGAGGAACACGCTATGGTTTCACCAAAATCCCCGCCAGAGATGGCTGTTACTGGATCTTAA 2673 0.3947 MLRQWQLGFPVDSPKLDHLAILLPTMGAPEKSQTNANSMQRVKVYRLNGDGKWDDQGTGHVSVDYLERSEDLGLYVYDEEDNENILLHRISPDDIYRKQEDTIISWRDPEYATELALSFQVPGGCSYIWDHICNVQRNMNFNTLNSEAFHSGNSESRDLPTVELSTLPLILKMVVESDNTDQSRLAELILSDQDFFRKLIEVFRVCEELENMDGLHMIFKIIKGIILLNSTQIFERLFSDELMMDIIGTLEYDPKVPHVQHHRKFLKDHVIFKEALPIRNSIVLSKIHQTYRVGFLKDVVLARVLDEATVANLNSIVHANNAIVVSLLKDDSTFIQELFARLKSPTTSPESKKNMVHFLHEFISCSKSLQMVRQLRLFRDLMNEGIFDVISDLLLQSQDKKLMLTGTDILILFLNQDPNLLRSYVVREEGITLLGLLVKGMITDFGDDMHCQFLEILRSLLDSCSLSGAQRDTIIDIFYEKHLGQLIDVITASCPTENVHVNSQIKCQSGTKPEILSNICELLCFCVQHHPYRIKCNFLLNKVTDKILLLSRRREKYLVVGAVRFVRAILSRHDEHLINHFVRSDLLKPIVDAFVANGNRYNLLNSAVLELFEYIRKENMKLLLKYIVDSFWDQLVKFEYLVSIHSLKIKYEQYLDNDGIKGTSIMNDIRRRLDERAPEKEEEDYFNEDSDEEDTASASNSHNQKVKQRQHALSNGDAESYSKLSPRSGGLVDYDYDEDDEDYRPPPRNNPEASEEYEGTMESLRLKRKLTKVEILQMPKLSKTSKSKDRVFAALCSTLSQAVLPRKKPLVNFITIPCIEDNQEKEQHVSGSCCENSSVSAELNHLEKETAASRNSSDRLYDTVDNGQLDGEEHAMVSPKSPPEMAVTGS* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0075 890 PANTHER BINDING PROTEIN-RELATED 26 810 - -
Vra5g0075 890 SUPERFAMILY ARM repeat 316 631 IPR016024 -
Vra5g0075 890 MobiDBLite consensus disorder prediction 848 890 - -
Vra5g0075 890 Gene3D - 304 624 IPR011989 -
Vra5g0075 890 Pfam Phosphatase 4 regulatory subunit 3 193 381 IPR006887 -
Vra5g0075 890 MobiDBLite consensus disorder prediction 697 722 - -
Vra5g0075 890 SUPERFAMILY PH domain-like 40 136 - -
Vra5g0075 890 MobiDBLite consensus disorder prediction 673 762 - -
Vra5g0075 890 Gene3D - 35 156 IPR011993 -
Vra5g0075 890 PANTHER ATP SYNTHASE GAMMA-RELATED 26 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0075 Vra-Chr5 580349 598841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0075 K17491 - gmx:100802657 1402.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2785 7 48091113 48117715 Vra5g0075 5 580349 598841 PCT