Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0068 ATGTCTTCTCTCTTCTCCATTACCAAGATGTTCTCATTCTCCACTCTCATGCTTCTTCTCCAACTGTTCACTATAAACCTTCCCCATGCAGATGCTCAAATTGGCGTATGTTATGGCACAATGGGTGACAATTTACCTCCGGCAAGTGAAGTTGTAAGCCTTTACGTATCAAACAGTATAACAAGAATGAGAATCTATTATACTAATCAAGATGCTTTGAATGCACTTCGAAATTCAAACATTGAGCTCATTCTTGGCGTAGCCAACCCCGATCTTCAAGCGCTTGCAACCAGTTCCAACAATGCTATTCAGTGGGTGCAAAACAATGTCTTGAACTACTTCCCTTATGTCAAAATCAAATACGTGGCAGTCGGCAACGAAGTGAATCCCGTTGGAGCAAACTCTCAGTATGCGCAGTATGTTCTGCCTGCAATTCAAAACATATACCAAGCTATTAGGGCTCAAGGTCTTCAAGATCAAATTAAGGTTACAACAGCCATTGACATGAGCATGTTAGGAAACTCTTACCCTCCATCACAAGGCTCCTTCAGAGCTGATGTGAGGTCATACATAGACCCCATAATCGGCTACTTGGTATATGCAAATGCACCTTTACTAGCAAATATCTACCCTTATTTCAGCTACGCTGATAACCCTACTGACATATCACTTTCTTATGCTCTTTTCACCTCACAAACTGTTGTGGTATGGGATGGTCAATACGGATACAAAAATTTGTTTGATGCTATGTTGGATGCATTGCATGCTGCAATTGATAACACTGGAATTGGTTATGTTGAGGTTGTTGTGTCGGAGAGTGGATGGCCGTCAGATGGAGGGTTTGCCGCCACTTACAACAACGCAAACACCTACTTAGGTAATTTGATTCTTCGTTCTAAAACAGGTACTCCTAGAAGGCCTTCGAAACCTACAGAAATCTATATTTTTGCTATGTTCGATGAGAATCAAAAGAGTCCTGAAATAGAGAAACATTTTGGACTCTTCTTCCCTAACAAGCAAAAGAAATATACATTTGGATTCACTGCATAA 1050 0.4076 MSSLFSITKMFSFSTLMLLLQLFTINLPHADAQIGVCYGTMGDNLPPASEVVSLYVSNSITRMRIYYTNQDALNALRNSNIELILGVANPDLQALATSSNNAIQWVQNNVLNYFPYVKIKYVAVGNEVNPVGANSQYAQYVLPAIQNIYQAIRAQGLQDQIKVTTAIDMSMLGNSYPPSQGSFRADVRSYIDPIIGYLVYANAPLLANIYPYFSYADNPTDISLSYALFTSQTVVVWDGQYGYKNLFDAMLDALHAAIDNTGIGYVEVVVSESGWPSDGGFAATYNNANTYLGNLILRSKTGTPRRPSKPTEIYIFAMFDENQKSPEIEKHFGLFFPNKQKKYTFGFTA* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0068 349 Pfam Glycosyl hydrolases family 17 34 346 IPR000490 GO:0004553|GO:0005975
Vra5g0068 349 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 30 345 - -
Vra5g0068 349 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 30 345 IPR044965 GO:0004553|GO:0005975
Vra5g0068 349 ProSitePatterns Glycosyl hydrolases family 17 signature. 266 279 IPR000490 GO:0004553|GO:0005975
Vra5g0068 349 Gene3D Glycosidases 33 348 - -
Vra5g0068 349 SUPERFAMILY (Trans)glycosidases 34 346 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0068 Vra-Chr5 517174 518673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0068 41 349 Glycoside Hydrolase AT4G16260 60.129 5.56e-136 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0068 - - ccaj:109791097 542.732