Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0056 ATGATGTTCTTGAAGAGGATGTCGCAGCTATGCTTCAAACCAACTCCTTTTCTTCTGTTCTTCCTAGGTTTCTACGTCGCACTCTCTACTCCGGAGGATCCCATCAACTGCTCCTCACACAACACAAACTGCACCATCACTAACTCCTATGGTACATTCCCTGATCGAAGCATCTGTCAAGCACAAAAGGTGTTTTACCCTACACAAGAAGAAGATCTTCTCAGAGTGGTTGCATCAGCCACTCGAAACGGAAACAAGATGAAAGTTGCCACCCGTTTCTCCCACAGCATCCCCAAGTGGGTGTGCCCTGAAGGTCACAATGGGTGGCTAATAAGCACCAAATATCTCAACAGGGTAATGGAGATTGACGCCGAGAAAAGGACGGCAAGGGTGCAGAGTGGCGTGACGTTGAAGCAGCTGGTGGAGGAGGCTGCGAAGGCGGGCTTGGCCTTGCCGTACACGCCGTACTGGTGGGGTTTGACGATGGGTGGCATTTTGGGGACAGGAGCTCACGGAAGCAGCTTGTGGGGAAAAGGAAGTGCGGTTCATGAACAGGTGGTGGAGATTAGAATTGTTACGCCTGCACCTTCTGAACATGGATATGCCAAGCTTCATATTCTAACAGAAGAAGATCAACATCTCAATGCAGCAAAAGTCTCACTCGGCTTGCTTGGGGTCATTTCACAGATTACTTTCAAACTTGAACCTCTGTTCAAGCGATCCATCACATATGTTACAGAAAACGATTCAAATTTGGAGAACCAAGTCATAACATTTGGACAAGAACATGAATTTGCAGATATAATTTGGTACCCAACTCAACACAAGGCTGTATATCGTGTTGATGATCGTGTTTCAATTCATACATCAGGTGATGCTGTTTACGATTTCATCCCTTTCCGTTCCACTCCTGCAACTCAATTACAACTCCTCAGAACCACAGAGGAAGCTGTGGAGTTTACTGGTGATGCAAAGGGGAAATGCTTAGTTGCAAAGACAGCAACCAATGCCCTTATAGCCACTGCTTATGGACTAACTAACAATGGTTTAGTCTTCTCTGGATTCCCTGTAGTTGGATTTCATAACCACATTCAGGCTTCTGGGTCATGCCTGGGCAGTGATAGGAATACAAAGATGACAACATTCTGTCCCTGGGACTCTAGAATCAAAGGAGAGTTCTTTCACCAAACGGCATTTAGTATTGGGTTGTCTGTGGTAAAGAACTTTATTGAAGATTTGAAAAAGCTGGTTGAAATGGAACCAAAGGCATTTTGTGGCATAGAGATGTACAACGGGATTCTGATGCGTTATGTGAAGGGTTCAAGTGCATACCTAGGGAAACAAGAGGATGGCGTAGACTTTGATATCACATACTACCGTAGCAAAGACCCAATGGCTCCTAGGCTGTACGAAGACATTATTGAAGAGGTTGAGCAGATAGGGATTTTCAAATATGGAGGTTTACCACATTGGGGTAAGAACAGGAATGTGGCATTTGAAGGAGTGATGAACAAGTACAAAAATGCAGAGAAGTTTCTGAAGGTGAAAGATGAGTATGATCCAGAAAGGCTATTCTCCAGCGAGTGGACAGACCAAGTTCTTGGTATGAAAGAAGGGTTGATGGTATCAAAGGATGGGTGTGCATTAGAAGGTCTGTGCATATGCTCCAATCACAACCATTGTGCACCAACCAAAGGCTACTTTTGCAGACCAGGCAAAGTCTACAAAGAAGCAAAGGTTTGTGCTGGTTCAGGATCTTAA 1761 0.4492 MMFLKRMSQLCFKPTPFLLFFLGFYVALSTPEDPINCSSHNTNCTITNSYGTFPDRSICQAQKVFYPTQEEDLLRVVASATRNGNKMKVATRFSHSIPKWVCPEGHNGWLISTKYLNRVMEIDAEKRTARVQSGVTLKQLVEEAAKAGLALPYTPYWWGLTMGGILGTGAHGSSLWGKGSAVHEQVVEIRIVTPAPSEHGYAKLHILTEEDQHLNAAKVSLGLLGVISQITFKLEPLFKRSITYVTENDSNLENQVITFGQEHEFADIIWYPTQHKAVYRVDDRVSIHTSGDAVYDFIPFRSTPATQLQLLRTTEEAVEFTGDAKGKCLVAKTATNALIATAYGLTNNGLVFSGFPVVGFHNHIQASGSCLGSDRNTKMTTFCPWDSRIKGEFFHQTAFSIGLSVVKNFIEDLKKLVEMEPKAFCGIEMYNGILMRYVKGSSAYLGKQEDGVDFDITYYRSKDPMAPRLYEDIIEEVEQIGIFKYGGLPHWGKNRNVAFEGVMNKYKNAEKFLKVKDEYDPERLFSSEWTDQVLGMKEGLMVSKDGCALEGLCICSNHNHCAPTKGYFCRPGKVYKEAKVCAGSGS* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0056 586 SUPERFAMILY FAD-binding/transporter-associated domain-like 49 236 IPR036318 GO:0050660
Vra5g0056 586 Gene3D - 118 236 IPR016169 -
Vra5g0056 586 ProSiteProfiles PCMH-type FAD-binding domain profile. 57 237 IPR016166 GO:0071949
Vra5g0056 586 PANTHER GULONOLACTONE OXIDASE 16 582 - -
Vra5g0056 586 Pfam D-arabinono-1,4-lactone oxidase 395 532 IPR007173 GO:0003885|GO:0016020
Vra5g0056 586 Pfam FAD binding domain 62 194 IPR006094 GO:0050660
Vra5g0056 586 Gene3D - 395 496 - -
Vra5g0056 586 PANTHER D-ARABINONO-1,4-LACTONE OXIDASE-LIKE PROTEIN 16 582 - -
Vra5g0056 586 TIGRFAM pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase 31 581 IPR010030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0056 Vra-Chr5 447208 450796 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0056 K00103 - gmx:100806810 967.607