Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0050 ATGACGGAGATGGAGATTGAGGGCGAGAAACAGCAGAAGTTCGTTGTGGATCTCGGCAACCTCGTGGCTTTCGACTCCAATCACACTTTCCCCTCTCAACCACCTCTTTCCAGGGAGGAAATCGTCAAGCAGTGTTTGCTGAAAGGCACTCACTTGGTTCAAGCTATCGCAGATGCCCTCTTCACCTTACCATCAACGGAAGATGTAGATGGCCCCCTTGTCAACTTGCCTACGCCACTAACTAAATTGCCAAGAGAAAAACATCTTCCAAAACCTAAGCCTCCTACTAAATGGGAAGTTTTTGCCAAAAAGAAAGGCATACAGAATCGGAAGAAAGACAAGATTGTGTATGATGAACAATCTGGAACCTGGAAACGGAGATTTGGGTATGATCGTGCAAATGATGAAGACGCTGTACCTATCATTGAGGCAAAAGAAACTGATGATCCAGCAGAGGATCCTTTTGCAAAAAGAAAAGAAAATAAGAAGAAAAGAATTGAAAAACAAGATAAAAATCGACTACAGAACTTGAAAGAAGCTGCTAAATTTGGTGCTTTACCAAGCCATGTTCAGTTGGCGGCTACAGCTTTGCCTATAACAGGAACTCAGGCAGCGCCCAAGAAAGTTACAAAGGATGAACTAGGTAATGTAGCAGGAATCGCAGCAACTGCAACAGCCAGTGGTGGGAAATTTGACAAGAAATTGCCGGGTGAAAAGCCTGCAAAACATAAAGGAAAATATCGAAAGTTCTTGCCAGTGGTGGAAGGAACCGGGATAGGATCACAAGAGAGGGAGCAAACTGAAAAAATATTGAACAAAATCATCTCCAAGAATTCTCACAACATACTAAATGTTGAAAAGGCCGTCACAATGCACAATGTGAAGAAAGAGAAGAAACGAAGGAGCGAGAAAGGGAAGGCTTCACCAGCTGACAACAAATTGAAACCTGAGAAAAAGTCTTTTAAAAAAGGAAATTTCAAGAAAAAGGGAGATTTCAAGAAAGGAAAAGGGAAAGGAAAATAA 1023 0.4203 MTEMEIEGEKQQKFVVDLGNLVAFDSNHTFPSQPPLSREEIVKQCLLKGTHLVQAIADALFTLPSTEDVDGPLVNLPTPLTKLPREKHLPKPKPPTKWEVFAKKKGIQNRKKDKIVYDEQSGTWKRRFGYDRANDEDAVPIIEAKETDDPAEDPFAKRKENKKKRIEKQDKNRLQNLKEAAKFGALPSHVQLAATALPITGTQAAPKKVTKDELGNVAGIAATATASGGKFDKKLPGEKPAKHKGKYRKFLPVVEGTGIGSQEREQTEKILNKIISKNSHNILNVEKAVTMHNVKKEKKRRSEKGKASPADNKLKPEKKSFKKGNFKKKGDFKKGKGKGK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0050 340 MobiDBLite consensus disorder prediction 320 340 - -
Vra5g0050 340 PANTHER RIBOSOME BIOGENESIS REGULATORY PROTEIN 9 319 IPR007023 GO:0005634|GO:0042254
Vra5g0050 340 Pfam Ribosome biogenesis regulatory protein (RRS1) 15 177 IPR007023 GO:0005634|GO:0042254
Vra5g0050 340 MobiDBLite consensus disorder prediction 303 319 - -
Vra5g0050 340 MobiDBLite consensus disorder prediction 289 340 - -
Vra5g0050 340 MobiDBLite consensus disorder prediction 149 170 - -
Vra5g0050 340 PANTHER RIBOSOME BIOGENESIS REGULATORY PROTEIN 9 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0050 Vra-Chr5 411380 415651 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0050 K14852 - gmx:100527796 535.028