Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0047 ATGTCGAAGGACAAACATTCCAATGATCCCAGACGCGCAGCATGCACGGCCATCACCATCTTCCTCCTCTTAGCTGGCGTTACTCTTCTCGTGCTCTGGCTGGTCTACCGTCCCAACAAGCCCCGCTTCACGGTGATCGGAGCCGCCATCTACGGCCTCAACGCCACCACCCCACCGCTCATGTCCACCACCATGCAATTTTCCGTCCTCATAAAGAACCCCAACAGGCGCGTCTCCATTTACTACGACAGACTATCGGCCTTCGTCTCCTACAGGAACCAGGCCATAACGCCTCAGGTCCTGCTGCCGCCGCTGCACCAGGGCAAACACACCGCGGTGTCGGTATCGCCAGTGATCGGAGGGACGGCGGTGCCGGTGTCGGTGGAGGTGTCAAACGGGTTGGTGGTGGACGAGGCTTATGGGGTGGTGGGTCTGAGGCTCATATTTCAAGGCAGGGTGAGGTGGAAAGCTGGTGCCATCAAAACAGCGCACTATGGACTGTATGTGAAGTGCGATGTGTTGATGGGTTTGAAGAAAGGTTTGGTGGGTCCGGTTCCTCTCCTCGGAGTTACACCCTGCGATGTCGACGTATGA 594 0.5741 MSKDKHSNDPRRAACTAITIFLLLAGVTLLVLWLVYRPNKPRFTVIGAAIYGLNATTPPLMSTTMQFSVLIKNPNRRVSIYYDRLSAFVSYRNQAITPQVLLPPLHQGKHTAVSVSPVIGGTAVPVSVEVSNGLVVDEAYGVVGLRLIFQGRVRWKAGAIKTAHYGLYVKCDVLMGLKKGLVGPVPLLGVTPCDVDV* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0047 197 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 7 196 - -
Vra5g0047 197 Pfam Late embryogenesis abundant protein 69 170 IPR004864 -
Vra5g0047 197 PANTHER OS05G0367900 PROTEIN 7 196 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0047 Vra-Chr5 401937 403763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g0047 11 173 EF-hand Containing Proteins AT5G21130 22.289 2.95e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0047 - - gmx:100804161 352.058