Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0046 ATGGCCTCAACCTCCTCCTCCACCCTCTCTTTATCCTCTTCCTCCACCCTTGTTGACGCCAAGGCTCCAAGGCAATCACCATCTTCTTCCCCACAATGTGTCACCCTTCCCACTCTCCCTCCACCACCTGTCCACTCTCAGACTCGTCCTTCCAAAACTGCTGCTTTCTGTCGCAGGATTGCTCGAAATGTTATGGGAATGGCTACCACAAGAGAGGCACCGGCAGCAGAAGTTGCCACAACTGAGCTTGCCATTGCTGAGACGCCAGAGATTGTGAAGACTATTCAAGAAGCTTGGGAGAAAGTTGAAGATAAATATGCAGTGAGTTCGCTGGCCGTAGCTGGTGTGGTTGCATTGTGGGGCTCAGCAGGAATGATCTCAGCAATTGATAGGCTTCCTTTAATTCCTGGAGTTCTTGAGGTTGTAGGCATTGGCTACACTGGGTGGTTTGCTTACAAGAACATAGTTTTCAAGCCAGACAGGGAAGCTTTTCTAAGAAAGGTAAAAGAAACATATAATGAAATACTTGGGAGCAGCTAA 540 0.4833 MASTSSSTLSLSSSSTLVDAKAPRQSPSSSPQCVTLPTLPPPPVHSQTRPSKTAAFCRRIARNVMGMATTREAPAAEVATTELAIAETPEIVKTIQEAWEKVEDKYAVSSLAVAGVVALWGSAGMISAIDRLPLIPGVLEVVGIGYTGWFAYKNIVFKPDREAFLRKVKETYNEILGSS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0046 179 MobiDBLite consensus disorder prediction 1 33 - -
Vra5g0046 179 MobiDBLite consensus disorder prediction 1 52 - -
Vra5g0046 179 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 93 177 IPR025564 -
Vra5g0046 179 PANTHER - 1 179 IPR033344 GO:0009579
Vra5g0046 179 PANTHER PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0046 Vra-Chr5 396841 398283 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0046 - - gmx:100793015 252.677