Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0040 ATGGCTGAGAATGGCGAAGAAGCTCAAGAAAATCGTCCAGTTCCCCGTTTGAATGAAAGAATTCTTTCTTCTTTGTCAAGGAGATCAGTAGCTGCCCATCCTTGGCATGATCTTGAAATTGGACCGGAGGCTCCTCAGATTTTCAACTGTGTTGTGGAGATCACTAAAGGAAGCAAGGTCAAGTATGAACTTGACAAAAAGACTGGATTAATTAAGGTTGATCGGATTCTGTATTCATCTGTTGTTTATCCTCATAACTACGGTTTTATCCCTCGCACACTGTGTGAAGACAATGATCCAATGGATGTCTTGGTCCTCATGCAGGAACCAGTACTTCCTGGTTGTTTCCTGCGAGCCAGGGCCATTGGAATCATGCCCATGATTGACCAGGGAGAGAAAGATGATAAAATTATTGCAGTGTGCGCTGATGACCCAGAATATAAACACTTTACAGACTATAAAGAACTTGCACCTCACCGCATCTCTGAGATCCGACGCTTCTTTGAAGACTACAAAAAGAATGAGCACAAGGAAGTAGCAGTTAATGACTTTCTACCTGCAAGCGTTGCTGTTGATGCCATCCAATACTCAATGGATCTCTATGCAGAGTATATTCTGCACACCTTGAGGCGATAG 636 0.4324 MAENGEEAQENRPVPRLNERILSSLSRRSVAAHPWHDLEIGPEAPQIFNCVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVLPGCFLRARAIGIMPMIDQGEKDDKIIAVCADDPEYKHFTDYKELAPHRISEIRRFFEDYKKNEHKEVAVNDFLPASVAVDAIQYSMDLYAEYILHTLRR* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0040 211 SUPERFAMILY Inorganic pyrophosphatase 27 207 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra5g0040 211 PANTHER INORGANIC PYROPHOSPHATASE 17 210 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra5g0040 211 Gene3D Inorganic pyrophosphatase 29 207 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra5g0040 211 CDD pyrophosphatase 46 199 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra5g0040 211 Pfam Inorganic pyrophosphatase 50 201 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra5g0040 211 ProSitePatterns Inorganic pyrophosphatase signature. 97 103 - -
Vra5g0040 211 Hamap Inorganic pyrophosphatase [ppa]. 46 202 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vra5g0040 211 PANTHER BNAC07G03580D PROTEIN 17 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0040 Vra-Chr5 351102 352719 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0040 K01507 - gmx:100811094 420.624