Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0036 ATGGTTGGAGTGGGCATGGCACTAAGAGGAAAATGGGTTTTGTTTCCACTCTATTGTTTTTGCCTCATTCCGATATGTTTGTCGGCGGCGAAGGAAGGAAAGCCGCCACAACAGCAGAAGTTGCGGTTCGGGGAAAACGGACAGTTCAAGATCTTGCAGATTGCTGACTTGCACTATGCTAATGGGAAGACTACCCACTGCCTGGATGTGTTGCGTTCTCAGTATGCTTCTTGCTCTGACCTCAACACCACCGCCTTCATCCAAAGGATCATCCTTGCTGAGAAACCCAACCTAATTGTCTTCACTGGGGATAATATATTTGGACATGATGCCTCGGATCCGGCCAAATCAATGGACGAGGCATTTGCTCCTGCAATCGCTTCAAACATTCCTTGGGTAGCTGTTCTGGGCAACCATGACCAGGAAGGATCCCTCTCTAGGAAAGGGGTGATGAAATATATTGCTGGGATGAAAAACACTTTATCTATTGTCAATCCTCCGGATGTACACATAATTAATGGTTATGGGAACTATAATTTAGAGGTTGGAGGAGTTAAGGGTACTGATTTTGAAAATAAATCAGTGCTCAATCTCTACTTTCTCGACAGTGGAGATTACTCCAAGGTTCCTTTCATTCCTGGCTATGGCTGGATCAAACCCTCTCAGCAACTTTGGTTCCGACGGACATCGAAAAAACTTAGGAAAGCATACATGAATGGACCAGTGCCTCAGAAAGAACCTGCACCTGGTCTTGCATACTTTCACATTCCATTACCTGAATATGCTAAGTTTGATTCATCAAACTTCACAGGCGTGAAACAAGAAGGCATAAGTTCTGCTTCTGTGAATTCTGGCTTCTTCACAACACTGGTTGAATCAGGAGATGTGAAGGCAGTTTTCACTGGCCATGATCATGTCAATGACTTCTGTGGGAAGTTAACAGGTATAAATCTTTGTTATGCTGGAGGATTTGGGTATCATGCTTATGGCAAAGCTGGATGGTCTAGAAGAGCAAGAGTGGTGGTAGTTAGCTTGGAGAAAACAGAGAATGGCCATTGGGAAGATGTCAAATCAGTTAAAACGTGGAAACGCCTTGATGATCAAAATCTAACTGGTGTTGATGGTCAGGTCTTATGGAGCAAGAATTTTAGAAGCTACCGCAGGAAAAAACAAGATGGCGACTCTTGA 1188 0.4402 MVGVGMALRGKWVLFPLYCFCLIPICLSAAKEGKPPQQQKLRFGENGQFKILQIADLHYANGKTTHCLDVLRSQYASCSDLNTTAFIQRIILAEKPNLIVFTGDNIFGHDASDPAKSMDEAFAPAIASNIPWVAVLGNHDQEGSLSRKGVMKYIAGMKNTLSIVNPPDVHIINGYGNYNLEVGGVKGTDFENKSVLNLYFLDSGDYSKVPFIPGYGWIKPSQQLWFRRTSKKLRKAYMNGPVPQKEPAPGLAYFHIPLPEYAKFDSSNFTGVKQEGISSASVNSGFFTTLVESGDVKAVFTGHDHVNDFCGKLTGINLCYAGGFGYHAYGKAGWSRRARVVVVSLEKTENGHWEDVKSVKTWKRLDDQNLTGVDGQVLWSKNFRSYRRKKQDGDS* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0036 395 SUPERFAMILY Metallo-dependent phosphatases 45 368 IPR029052 -
Vra5g0036 395 CDD MPP_Dcr2 47 330 - -
Vra5g0036 395 PIRSF Ptase_At2g46880 7 379 IPR011230 -
Vra5g0036 395 PANTHER - 38 383 - -
Vra5g0036 395 Gene3D - 47 356 IPR029052 -
Vra5g0036 395 PANTHER PHOSPHOESTERASE, METALLO-DEPENDENT PHOSPHATASE-LIKE PROTEIN-RELATED 38 383 - -
Vra5g0036 395 Pfam Calcineurin-like phosphoesterase 49 306 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0036 Vra-Chr5 301772 305770 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0036 - - gmx:121174150 712.605