Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0033 ATGATGAGAAATCTCTCTGCATCTCATTCCTTTGGGCTTTTCGTCACCTCACCCATCTTTCTTGCCAATAACCGTTCTTCTCTCACTCTCTTCTCACCTTCCACTCGAAGATTTCCTCCTTCCATTCAATGCGCGGCTCAATTCCGTCCCTGCATCGACATCCACAAGGGAAAAGTGAAACAAATTGTGGGGTCAACCTTGCAAGACTTGAAAGGGGGTGATGATGGGTCGGATCCTGTGACCAATTTTGAGTCTGATAAGTCGGCTGCTGAATATGCTACTCTTTACAGACGAGATGGACTCACGGGTGGCCATGTCATCATGCTTGGTGCAGACCCTTTGAGCAAAGCTGCTGCCTTGGAAGCATTGCATGCTTATCCCGGTGGTCTACAAATTGGAGGGGGAATAAATTCTGACAATTGTTTGAGTTACATAGAAGAGGGAGCAAGCCACGTCATTGTGACTTCTTACGTATTCAATGATGGACAAATGGATGTTGGAAGGCTAAAAGATCTTGTTCAAATTGTTGGAAAAAAGAGACTTGTGTTGGATCTCAGTTGTAGAAAAAAGGATGGTAAATATGCAATTGTCACTGATAGATGGCAGAAGTTTAGTGATGTTTTTGTTGATCCTGGTGTGATGGAATTTCTTGCCAACTTTGCTGATGAGTTTTTGGTTCATGGTGTTGATGTTGAAGGGAAAAAGTTGGGAATTGATGAAGAGCTTGTTGCTTTGCTTGGCAAGCATTCACCTATTCCTGTTACTTATGCTGGTGGTGTGACCGGAATGGCTGACCTAGAGAGGATTAAAAGTGCGGGAATGGAACGGGTGGATGTAACTGTGGGTAGTGCCTTGGATATTTTTGGAGGAAACATGTCTTACGAAGAGGTTGTAGCTTGGCATGCCCAGCAAAGGGCCCATGTAGTTTGA 930 0.4441 MMRNLSASHSFGLFVTSPIFLANNRSSLTLFSPSTRRFPPSIQCAAQFRPCIDIHKGKVKQIVGSTLQDLKGGDDGSDPVTNFESDKSAAEYATLYRRDGLTGGHVIMLGADPLSKAAALEALHAYPGGLQIGGGINSDNCLSYIEEGASHVIVTSYVFNDGQMDVGRLKDLVQIVGKKRLVLDLSCRKKDGKYAIVTDRWQKFSDVFVDPGVMEFLANFADEFLVHGVDVEGKKLGIDEELVALLGKHSPIPVTYAGGVTGMADLERIKSAGMERVDVTVGSALDIFGGNMSYEEVVAWHAQQRAHVV* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0033 309 Pfam Histidine biosynthesis protein 50 285 IPR006062 GO:0000105
Vra5g0033 309 PANTHER 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE 41 305 IPR044524 GO:0000105|GO:0003949
Vra5g0033 309 Gene3D Aldolase class I 46 305 IPR013785 -
Vra5g0033 309 PANTHER 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE, CHLOROPLASTIC 41 305 - -
Vra5g0033 309 TIGRFAM hisA_euk: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 47 301 IPR011858 GO:0000105|GO:0003949
Vra5g0033 309 CDD HisA_HisF 47 299 - -
Vra5g0033 309 SUPERFAMILY Ribulose-phoshate binding barrel 47 300 IPR011060 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0033 K01814 - gmx:100793426 527.709