Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0030 ATGGAAAGGGATTCATCTTCCGACGAAGTAGACGAGTTCATCCATCGGAAGGAGAGGAATGCGCCTACATCTCCCTCTTCCTTCCACTTCCAACCCCTCACTGCGCGAATCACTTCCAACTTCAACTTTCCTTTTCAGAAGCGATACCTCTTCGCCATTCTCCCTCTCTTCGCAATCCTCCTCTACTACGTCATCCCCGATTCCCACTCGCTCTTCTCCCTCTCCTCCGTCAACCTCAATCTCCGCCACCATCAACCCGAGGAATCTCAATTGCGCGCCCTTTACCTTTTGCGCCAACAGCAATTAGGGCTTCTCCACGCTCTCAATTCCACTTCCCAAACTCCCACTCTCAAATCCCTTCTATCCAACCAGATTTTCCTCAACTCACAGATTCAGCAGCTTCTTCTCAGTCCCTACACCCCTGCCACCTCTCTCTATTTTCGGAACGCCTCGTGTGGAACAGTGGATCAGAACCTGCGAGAAAGGAGGACCATCGAGTGGAGGCCCAAGGCTAATAAATTTTTGGTTGCAGTGTGCGTCTCGGGGCAGATGTCTAACCATCTGATGTGCTTGCAGAAGCAGATGTTCTTCGCGGCTCTCCTTAACCGGGTCCTGGTTATTCCCAGCTCCAAGGTGGATTATGAGTACGAGAGAGTATTGGATGTGGAGCACATGAATAAATGCATTGGAGGTAAAGTCAAAGCAGTGATCTCCTTCCAAGAGTTTTCTAGCATGAGGAAGAATGGCAAGCACGAGGGTAAATTCTTGTGTTATTTTTCGCTGCCTCGACCCTGTTGTCTGGATGAGGAGCATTTGAGGAAGTTGAAATCGTTGGGGCTTTTGTCTACAAATAGGCCTGCGACTGTGTGGGATGAAGATGCGAGGAAGCCCAGAACGAGGAGCGTGGAAGAGGTTGTGTCAAGATTTTCACGGGAGGAAAAGGAGGATGTTTTAGCCATTGGGGATGTATTGTATGCAGATGTGGAGGAAGAATGGGTGACGCAAGCAGGTGGCCCATTGGCTCATCGATGCAAGACTCTGATTCAACCCAACCGTCTCATTTTCCTCACCGCTCAACGTTTTATCCAAACCTTCCTCGGCAGGAACTTCCTTGCATTGCATTTCCGAAGACACGATTTCTTGAACTTCTGTAATGGTAAAAAACCAAGTTGCTTTTATCCTATTCCTCAAGCAGCAGATTGTATCTTGCGTGTGGTTGAAAGAGCCAATGCACCCCTCATTTACCTCTCTACAGACGCCGCAGAGAGTGAAATTCGGCTGCTTCAGTCACTGCTTGTGAGAGAGGGCAGGCACGTTCCACTTGTCAAACGCCCACCTCGGAATTCGGCAGAAAAATGGGACTCTTTGTTGTACAGGCATCACATTGAAGGAGACCCTCAGGTGGAAGCTATGTTGGACAAGACTATATGTGCCATGTCTAGTGTGTTCATTGGAGCATCCGGTTCAACTTTCACCCAGGACATTCGACGGCTAAGAAAGGACTGGGGATCCACATCATTGTGCGATGAGTACCTTTGCCACGGTGAGGAGCCAAATGTTGTAGCGGAGATGGAATGA 1578 0.4918 MERDSSSDEVDEFIHRKERNAPTSPSSFHFQPLTARITSNFNFPFQKRYLFAILPLFAILLYYVIPDSHSLFSLSSVNLNLRHHQPEESQLRALYLLRQQQLGLLHALNSTSQTPTLKSLLSNQIFLNSQIQQLLLSPYTPATSLYFRNASCGTVDQNLRERRTIEWRPKANKFLVAVCVSGQMSNHLMCLQKQMFFAALLNRVLVIPSSKVDYEYERVLDVEHMNKCIGGKVKAVISFQEFSSMRKNGKHEGKFLCYFSLPRPCCLDEEHLRKLKSLGLLSTNRPATVWDEDARKPRTRSVEEVVSRFSREEKEDVLAIGDVLYADVEEEWVTQAGGPLAHRCKTLIQPNRLIFLTAQRFIQTFLGRNFLALHFRRHDFLNFCNGKKPSCFYPIPQAADCILRVVERANAPLIYLSTDAAESEIRLLQSLLVREGRHVPLVKRPPRNSAEKWDSLLYRHHIEGDPQVEAMLDKTICAMSSVFIGASGSTFTQDIRRLRKDWGSTSLCDEYLCHGEEPNVVAEME* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0030 525 MobiDBLite consensus disorder prediction 1 19 - -
Vra5g0030 525 Gene3D - 345 510 - -
Vra5g0030 525 PANTHER - 6 111 - -
Vra5g0030 525 PANTHER - 111 524 - -
Vra5g0030 525 MobiDBLite consensus disorder prediction 1 27 - -
Vra5g0030 525 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 6 111 IPR045130 GO:0036066|GO:0046922
Vra5g0030 525 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 111 524 IPR045130 GO:0036066|GO:0046922
Vra5g0030 525 Pfam GDP-fucose protein O-fucosyltransferase 211 500 IPR019378 -
Vra5g0030 525 CDD O-FucT_like 339 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0030 Vra-Chr5 258130 260722 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0030 K03691 - gmx:100776069 621.698