Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0029 ATGCCTTTGTTTGAGATTACGAATGCGCAACTATCCTTCCGTTATTCTCTGACGTTGAAGGCCCCAATGCCGTACCATGCGCCCAGAGGCTCCTGGATTTGCCTGGACAGCCTTAGGAATAGAAAGGATGCTAAGCTGAATGTGATTAAGGCTGTTGCCACCTTCGAACCTAACACTGTTGCTGCAAAACCACACTCCAACCACTTGGATGTAGTTCCTCTAACCCCTCCTTCCTTTGACCTTCAATTTTCCGACCAAGAAACCCAACAACCTCAACCCGATGACAGGGAGCGGTTGAGAAGAATGAGGATATCCAAAGCTAATAAAGGAAATACGCCCTGGAACAAAGGAAGAAAGCACTCTCCTGAGACTTTACGCAAAATCAAAGAAAGAACAAGGCTCGCGATGCAGAACCCTAAGATCAAAATGAAGCTCAGTAAGCTTGGCCACTCACAAACCACAGAAACAAGAATGAAGATTGGTGCTGGAGTGAGAAGGCGATGGGAAGAGAGGCGTGAAAAGAAGAAGGCAGCGGAGTCTTGCTGCTTTGAGTGGAAAAATTTAATTGCAGAAGCTTCTAGGAAAGGCTTTGTTGGTCAGGAAGAGCTGCAGTGGAATTCTTATGAAACCTTGGATGAACAGCTGAAGCAGGAGTGGTTGATGAGTGTTGACCAAAGGAAACAAATGATAAAGACATCAGGTGGCAAAAGAGCACCCAAGTCCCCTGAGCAGAGAAGGAAAATTGCAGAAGCCATTAGTGCGAAATGGGCTGATCCTGAATACCGTCAAAGAGTTTATTCTGCATTGTCCAAGTATCATGGCACTGAAGTTGGAGCTGAAAGGAAAACTAGAAGAAGGCCAAAAGATGATACCCAACCTACCAAGAAGAAACCTACAAAAAAAAGAGACACTGTTACTAGTGCTCATGTTAAGAATGACTCAAAAACCCATAAGCCCATCCTGTTGAAAAAAAGTAAATCCCCAGCGTACAAGGATCCTTTGGTGAATTCTAAGCTTGAAATGATAAAGAATATTAGAGCACAGAGAGCTGTTTCGGAAACCACACAAATTCAAGCCATTGAACGAGCAAGACTTTTGATTGCTGAAGCTGAGAAAGCTGCCAAGGCACTGGAGGTTGCTGCGACAAAGAGTCCTTTTGCACAGTCTTCTTTGATAGAGACCAGAAAGCTTATAGCTGAAGCTATTCAATCACTGGAATCCATTGATACACAAGCTATAACTGACAGTAATGTTCCTTCGGTTGGTTTGAGTGAGGTCAGTCAAGAAAAAGAATCAGCATCTGAAGTTCTAAACCAATCAAAATTGGCCCCAGTAAATGGACACACAACATTATCATCAATGGACTACAAGTTCCCTGAAAATTTTAGCAAATTTTCCTTGGAGAAGCCAGTTAATGGTGAACCTGAACTTCTCCTAACCAATGGTTGCGCATCCTTACCTTTTAGTTTGAATAGTCAGATAAGCGAGTCTAGTCCATCTAATCAACAAAGGGAAGCCGAACAGGATCAGAGAAGTGAATACGGAACAGAGCCTTCTCCAATAGTGATGGAAACTCAGTCCCTTGAAAATGAGACAGTGTCTAGATCACCTATAGTAGTATCTAAAAGATGGGTTCGCGGAAGGCTCGTCGAAGTGGCTGAAGAGAAACAATAA 1674 0.4331 MPLFEITNAQLSFRYSLTLKAPMPYHAPRGSWICLDSLRNRKDAKLNVIKAVATFEPNTVAAKPHSNHLDVVPLTPPSFDLQFSDQETQQPQPDDRERLRRMRISKANKGNTPWNKGRKHSPETLRKIKERTRLAMQNPKIKMKLSKLGHSQTTETRMKIGAGVRRRWEERREKKKAAESCCFEWKNLIAEASRKGFVGQEELQWNSYETLDEQLKQEWLMSVDQRKQMIKTSGGKRAPKSPEQRRKIAEAISAKWADPEYRQRVYSALSKYHGTEVGAERKTRRRPKDDTQPTKKKPTKKRDTVTSAHVKNDSKTHKPILLKKSKSPAYKDPLVNSKLEMIKNIRAQRAVSETTQIQAIERARLLIAEAEKAAKALEVAATKSPFAQSSLIETRKLIAEAIQSLESIDTQAITDSNVPSVGLSEVSQEKESASEVLNQSKLAPVNGHTTLSSMDYKFPENFSKFSLEKPVNGEPELLLTNGCASLPFSLNSQISESSPSNQQREAEQDQRSEYGTEPSPIVMETQSLENETVSRSPIVVSKRWVRGRLVEVAEEKQ* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0029 557 MobiDBLite consensus disorder prediction 274 325 - -
Vra5g0029 557 PANTHER NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSED 41 554 - -
Vra5g0029 557 MobiDBLite consensus disorder prediction 490 534 - -
Vra5g0029 557 MobiDBLite consensus disorder prediction 490 505 - -
Vra5g0029 557 PANTHER NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSED 41 554 - -
Vra5g0029 557 MobiDBLite consensus disorder prediction 77 98 - -
Vra5g0029 557 Coils Coil 552 557 - -
Vra5g0029 557 MobiDBLite consensus disorder prediction 513 534 - -
Vra5g0029 557 Coils Coil 360 380 - -
Vra5g0029 557 MobiDBLite consensus disorder prediction 275 320 - -
Vra5g0029 557 Pfam NUMOD3 motif 103 128 IPR003611 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0029 Vra-Chr5 254194 257592 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0029 - - gmx:100306569 776.163