Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0025 ATGCCAAACAACGGTAACTCGGATAGCAGAGAGGTTTCAGCCAGCAGAGATGGAAGCAGCTCTATCACGCACAGGAGACTAGATGCTCCCTCTACCCCTGGCAGACCCATTTTCAGCTTCAACAGTGTTGGCAAATTTTCAAGAAAGAGCTTCCCTTCCAAATGGGACGATGCAGAGAAATGGCTCATCAGCTCCCACCACTCCCCACCTCACGCTATAAAGCTTTCTGAGCCTTCTAACATAAAGGTGCACCCTGACTCTGCCAACTTTCAAGGCTGTGCGTCTTTGGACCACCATGACATAGCCCATGCTTCTGATGGGATCTCTTGCTCCATGCACACTGTGCTAAAAGGTGAGTTCACAGACAGCACTGTGCCCATTTTCCCAAATCGGCAATATTCAGAGACAACTGGAGAAGGGCTTTCGTTTGGAGACCCAACTGGGGAGGCAGTGAAAGATGCTTGCAAGGAAGTGGTTCGTAAGGATGTTGGGACGGAGATGACGCCTCTTGGAAGTTGCACAGCTTCAAGATGCCACACCCCATTCAAGAGTTCATCTCCTGCTCGCCATAACACTCCTGCAAGTAAGTCGGGACCATTGTCCTCCGCAAACCACAATAACAAAACCTGCACCGTTGACCTTATTCGGCTGGAGGAGTGTCATTTTGCCAAATTGCAAGTAGGAACACCGTATAATTCGGTAACATCACACTGGAGCTCAAGAGAAGAGGACGAAAAGGAAATGTCAAAGAGCTTGAGACATAATGCTAGCCAGAAAGCTGATTCAGACTGCAGGGTTGCTACGTGGGAACAAGAGGAAAAGACCAAGTCTTGTCTCAGGTATCAGAGAGAAGAAGCCAAAATTCAAGCTTGGTTAGACCTCCATAGTGCTAAAGCAGAAGCACAATCAAGGAAGCTTGAGGTAAAAATTCAAAAGATGAGATCATCCTTGGAAGAGAAGTTGATGAAGAAGATCGCAGTGGTTCACAGAAAAGCTGAGGAGTGGAAAGCAGCAGCCAGACAGCAGCACTTGGAGCAAATCAAGAAGACCGTTGAACAAGCACAAAAGATTAAGAAGCAGTGTAACCCTCAAGTCTTAGGCCACAACTCATGTGGTTGCTTCCCCTGCAATAACAATCATCACTAA 1146 0.4738 MPNNGNSDSREVSASRDGSSSITHRRLDAPSTPGRPIFSFNSVGKFSRKSFPSKWDDAEKWLISSHHSPPHAIKLSEPSNIKVHPDSANFQGCASLDHHDIAHASDGISCSMHTVLKGEFTDSTVPIFPNRQYSETTGEGLSFGDPTGEAVKDACKEVVRKDVGTEMTPLGSCTASRCHTPFKSSSPARHNTPASKSGPLSSANHNNKTCTVDLIRLEECHFAKLQVGTPYNSVTSHWSSREEDEKEMSKSLRHNASQKADSDCRVATWEQEEKTKSCLRYQREEAKIQAWLDLHSAKAEAQSRKLEVKIQKMRSSLEEKLMKKIAVVHRKAEEWKAAARQQHLEQIKKTVEQAQKIKKQCNPQVLGHNSCGCFPCNNNHH* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0025 381 MobiDBLite consensus disorder prediction 182 205 - -
Vra5g0025 381 MobiDBLite consensus disorder prediction 233 259 - -
Vra5g0025 381 PANTHER OS02G0116800 PROTEIN 7 377 - -
Vra5g0025 381 MobiDBLite consensus disorder prediction 238 259 - -
Vra5g0025 381 MobiDBLite consensus disorder prediction 1 27 - -
Vra5g0025 381 MobiDBLite consensus disorder prediction 1 38 - -
Vra5g0025 381 Coils Coil 340 360 - -
Vra5g0025 381 Coils Coil 296 316 - -
Vra5g0025 381 Pfam Remorin, C-terminal region 265 360 IPR005516 -
Vra5g0025 381 PANTHER OS11G0616300 PROTEIN 7 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0025 Vra-Chr5 233825 237669 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0025 - - aprc:113862102 517.694