Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0016 ATGGCATCCCTGGTGCCTGGAGTTCTACTGAAGCTTCTCCAGAGTATGAACTCTAACGTAAAAGTACGCGGGGAATATCGCTCTGTTCTTCTGCAGGTGATCAGCATCGTGCCCGCACTATCTGGCTCTGAATTATGGCCTAACCAAGGTTTCTTCATAAAAGTTTCCGACTCTTCTCATTCAACCTATGTCTCTCTTTCCAAGGAAGACAACGAGCTCATATTAAATAATAAGCTGCAGCTTGGACAATTCTTTTATGTGGATGGAATCGAGGCTGGCACACCTGTCCCTATTCTTGTTGGTGTTAGAGCACTCCCTGGACGCCATCCTTTTGAAGGCAATCCCAAGGACTTAATGCAGATGTTAGAACAATCAGAGCATCCTCGTAGTGATGGAGTTAATGATTCCAAATTCACGGATTTAACTGAAGCAAAAGAGAATTTCAGTTCAAGTCAGAAGATTGTTATTAAAGAGGAAAAACTAGGTGTTTCATCCAGGTATATGCAGGGTGTTCTGAATCCAAACTCAAAGCTTAATGGGTTAGAGGCTAATGTGGGAAGCAAAGGAAATGATCTAGAAATGGGCGCAGATGGTAAAAAGGTGGGAACTGCGAAAGGAAAGCAACTAGACATCAAAGGTCAGATGCTTCTGATGACTCAAACTGGCACTCGACTTGAAACATTTTCACTAAAGCAAGACGTCACTCGATCTAACATTCGGAAAGCTATCACAACATCTTCTGTGTGTACTTCTGCCAAACACAATAGTTCTACTAAACAGGAAAATTTGAATATGAATTTGTTGTCTCGCGCTAAAGATAAAAGCAAGAATGCTGAGACAATTTCATGGTCTTCTTTGCCAACCAAGCTTCTCAGGCCTGGAAAGGTTATTCTTAGAAGGAAACATCTAGCATCTCAGGTTGTAGTACAAGCGCAAAAGGAATTGTCTGCAGCAACAACCACTGTTAAATGCCTGAGTATGTTCGCCAACGTCTGTTCTTTAGCATCTTCAGAGAATCCTCATGCCACACTAAGCAAATTTTTTGCTCTCCAACAGCTCATGGACCAGCCAAATGCTACGGCTCAATTGAATGATAAATCACTTCAACTATACAGAATTTCAACTCCCTTAGAAAAGCATAAATCTGGCACGACAGCAGGTTTGATGCCAGCTAAAAGCACGGCAAAGTCTTCAAAACCTTTGACCGAACTATCAGGGACTGAGAAACAAGAATGGGCCAAAGGGGGTGGTATGAAAGAGATCAACGAGCTGAGAGAATTACTTTTAAATGAAACAAGATCGTGGTTTCTGATGTATCTGGAAAAGACATTAGATGCTGGGTTTTCCGTTAGCTCCCGTGAGAAGAGCAAGGATACTAAGGATGTTGCAGGGAGACAAATTGAGCAAGCCAACAATATAGCTCTAACACTGTCACACCTTAAGCATGCAAACGAGTGGCTGGACAAACTGAGGAGCAGTTGCAACACGGAAAGTGAAGGGATGGTGGAGACTGTTGACAGATTGAAGCAAAAAGTTTATTCTTGTTTGCTTGTACATATTGATTCCGCTGCTTTAGCATTGGGGAACCGAGCCTGA 1596 0.4248 MASLVPGVLLKLLQSMNSNVKVRGEYRSVLLQVISIVPALSGSELWPNQGFFIKVSDSSHSTYVSLSKEDNELILNNKLQLGQFFYVDGIEAGTPVPILVGVRALPGRHPFEGNPKDLMQMLEQSEHPRSDGVNDSKFTDLTEAKENFSSSQKIVIKEEKLGVSSRYMQGVLNPNSKLNGLEANVGSKGNDLEMGADGKKVGTAKGKQLDIKGQMLLMTQTGTRLETFSLKQDVTRSNIRKAITTSSVCTSAKHNSSTKQENLNMNLLSRAKDKSKNAETISWSSLPTKLLRPGKVILRRKHLASQVVVQAQKELSAATTTVKCLSMFANVCSLASSENPHATLSKFFALQQLMDQPNATAQLNDKSLQLYRISTPLEKHKSGTTAGLMPAKSTAKSSKPLTELSGTEKQEWAKGGGMKEINELRELLLNETRSWFLMYLEKTLDAGFSVSSREKSKDTKDVAGRQIEQANNIALTLSHLKHANEWLDKLRSSCNTESEGMVETVDRLKQKVYSCLLVHIDSAALALGNRA* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0016 531 MobiDBLite consensus disorder prediction 387 405 - -
Vra5g0016 531 MobiDBLite consensus disorder prediction 381 413 - -
Vra5g0016 531 PANTHER EXPRESSED PROTEIN 1 528 - -
Vra5g0016 531 Pfam Plant protein of unknown function (DUF936) 4 153 IPR010341 -
Vra5g0016 531 Pfam Plant protein of unknown function (DUF936) 228 366 IPR010341 -
Vra5g0016 531 Pfam Plant protein of unknown function (DUF936) 391 527 IPR010341 -
Vra5g0016 531 PANTHER EXPRESSED PROTEIN 1 528 IPR010341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0016 Vra-Chr5 187571 190569 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0016 - - pvu:PHAVU_009G262500g 895.96