Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0015 ATGGAACCTTTTGGTCGCGGTGGTGGTCGTGGTCACGGCCGTCGCTCTCAATCTACTTCACCGGTTGTTGTTGGCAACGAGCAATGTGGGCGAGGTAAGGGCAGGGAAGAGAAGAAGCAACCGGAGAATTCATCACCTGATTCTCCTTCCGATTCTGACTCTGTTGGAATGGGAATGGCAAAGTTAAATATTGGCGTTGATAAGTCATCAGCAGCCGCAGCAGTAGGAGAGGGAGGGTTCGATATATGTCCCCGTAAACAACCTGGAAGCGTGGTTCTGAAACCTCCATTGCTTGCACAGAACAGAGAAAGGAGAAGATCCCGTAGTAGTAATAACAATGGCATTGGGTTGTCGTTGAGGCCTGGGATGGTGTTTCTGAAGGGTTACCTTTCACTGAGCGATCAGCAGAAGATAGTGGAAAGGTGCAGGGAGTTGGGGATGGGCGTGGGAGGATTCTACCAGCCTGGCTACGAGGAAGGGACTAAGATGCATTTGAAGATGATGTGCCTCGGAAAGAACTGGGATCCTCACACCTCTCAGTACGGAGAACGACGACCATTCGACGGAGCAAAACCCCCCCAAATCCCTCCCGAGTTTCAGACATTGGTCACCAATGCACTTCGTGATTCCAACGCCCTCGTTCCTCAAAATCGCCTTCCCTCCATCTCGCCCGACATCTGCATTGTCAATTTTTACTCCCAAACTGGCCGTTTGGGTCTTCATCAAGACAAGGATGAAAGTGAAGACTCTCTTCGCCGAGGCTTGCCCGTCGTATCCTTCTCCATCGGAGACTCTGCACAGTTCCTCTATGGAGATCACAGGGATCCCGACAAGGCAGAGAAACTGCAACTCGAATCTGGGGATGTTTTGATCTTTGGTGGCTCCTCCAGAAATGTATTCCACGGAGTTAGCGCTATTCATCCAAACTCTGCCCCCAACCTCTTGCTGCAACACACTAATCTACGCCCTGGTCGATTGAATCTCACTTTCAGACAGTACTAA 1002 0.507 MEPFGRGGGRGHGRRSQSTSPVVVGNEQCGRGKGREEKKQPENSSPDSPSDSDSVGMGMAKLNIGVDKSSAAAAVGEGGFDICPRKQPGSVVLKPPLLAQNRERRRSRSSNNNGIGLSLRPGMVFLKGYLSLSDQQKIVERCRELGMGVGGFYQPGYEEGTKMHLKMMCLGKNWDPHTSQYGERRPFDGAKPPQIPPEFQTLVTNALRDSNALVPQNRLPSISPDICIVNFYSQTGRLGLHQDKDESEDSLRRGLPVVSFSIGDSAQFLYGDHRDPDKAEKLQLESGDVLIFGGSSRNVFHGVSAIHPNSAPNLLLQHTNLRPGRLNLTFRQY* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0015 333 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 74 333 IPR004574 -
Vra5g0015 333 Gene3D - 117 333 IPR037151 -
Vra5g0015 333 PANTHER 2OG-FE(II) OXYGENASE FAMILY PROTEIN 74 333 - -
Vra5g0015 333 Pfam 2OG-Fe(II) oxygenase superfamily 122 331 IPR027450 -
Vra5g0015 333 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 223 333 IPR005123 -
Vra5g0015 333 MobiDBLite consensus disorder prediction 85 115 - -
Vra5g0015 333 MobiDBLite consensus disorder prediction 1 58 - -
Vra5g0015 333 MobiDBLite consensus disorder prediction 30 44 - -
Vra5g0015 333 SUPERFAMILY Clavaminate synthase-like 119 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0015 Vra-Chr5 186143 187453 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0015 - - gmx:100809845 442.965