Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g0012 ATGAAGTTCCTCAGCTGGATGCAAACTAAAATTTCTGGAAAACAAGATAACAGAAAACCAGACACTTATACAACTACTACTTATGATGGAAAACAAGAGGGTCGAGAAGAGTTCAGCGATTGGCCTGATGGCTTGCTGGCTATCGGTACATTTGGAAATAACAAGGAAGCAATAGAGAAGTGCATCACTACTAAAGAGGAACCATCCTCCTCTGAGCAAATTCCTGACTTCACTCTTGAAGAAATTGGGAAGCTACAAAAAGAGCTCACTAAACTGTTGAGACAAAAACCTAAAGTGGAAAAGGAAATCGCCCACCTTCCTCTCGACAGATTCCTCAATTGTCCATCAAGCTTGGAGGTTGATCGGAGAATCAGCAACGTAGTTTGCACTGATTCTGAAAATAAAGATGACCACGACGAAGAAGAAGAAAAACAAGAACGAGAAGAAGATGATGATGATGATGAAGAAGACATTGAAAAGACTCTCGGTGTCATACTTGGCAAATTCAAAGAGATTTGTGCAAAAAAAAGTAAGAAAGCAATTGGGAAGAAATCAATTTCGTTTTTGCTGAAGAAGATGTTCGTTTGTAGAAGTGGTTTTTCCCCAACATCCAGCCTTAGAGATACCCTTCAACTACAGGAGTCAAGAATGGAGAAGCTTTTGAGGACGATTCTTCACAAGAAAATAAACACCCAGCATTCTTCTCGGGCACTGTCCCTGAAGCGACTGGAAGACAGGAGGAAGATGCCGATGGAGGAGGAAGCAGAGGCTGAAACTGATGACGGCGGTAAATGGGTCAAGACTGATTCTGAATATATTGTTTTAGAGATTTAA 834 0.4101 MKFLSWMQTKISGKQDNRKPDTYTTTTYDGKQEGREEFSDWPDGLLAIGTFGNNKEAIEKCITTKEEPSSSEQIPDFTLEEIGKLQKELTKLLRQKPKVEKEIAHLPLDRFLNCPSSLEVDRRISNVVCTDSENKDDHDEEEEKQEREEDDDDDEEDIEKTLGVILGKFKEICAKKSKKAIGKKSISFLLKKMFVCRSGFSPTSSLRDTLQLQESRMEKLLRTILHKKINTQHSSRALSLKRLEDRRKMPMEEEAEAETDDGGKWVKTDSEYIVLEI* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g0012 277 Coils Coil 82 102 - -
Vra5g0012 277 MobiDBLite consensus disorder prediction 8 29 - -
Vra5g0012 277 MobiDBLite consensus disorder prediction 135 157 - -
Vra5g0012 277 MobiDBLite consensus disorder prediction 1 36 - -
Vra5g0012 277 MobiDBLite consensus disorder prediction 131 157 - -
Vra5g0012 277 PANTHER OS03G0406300 PROTEIN 3 277 IPR044683 GO:0009630|GO:0040008
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g0012 Vra-Chr5 132020 135810 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g0012 - - var:108322232 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g0012 5 132020 135810 Vra9g0342 9 2856598 2859025 PCT