Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1410 ATGGAGAGGAGCATGAGGGTACCTTTTTACGTTCTTGCCATTTTTCTTCTCCTATCAGACCCTTTTGCTGTTATAAATGCAAACTCTGAAGGTGATGCTCTGTTCGCGTTCAGAAGAGCTGTGAAAGACCCAAATAACGTTCTGCAGAGCTGGGATCCAACTTTGGTGGATCCTTGTACATGGTTCCATGTTACCTGTGATGATGATAAGAGAGTAACCCGACTGGACCTCGGACACGCAAAACTGTCTGGTCATTTGGTTCCAGAACTAGGGAGGCTCCAGCGCCTTCAGTTTCTAGAACTGTACAAAAATGATTTGAAGGGTCCAATACCAAAGGAACTTGGAGACCTCAAGAACCTGGTTAGCTTGGGTCTCTACCAGAATAACCTCACTGGCTCCATTCCCGCCAGCCTGTCCAACCTCTCCCACATCAAATTCTTGCGGCTCAACAGCAACATGCTCACTGGAAGAATACCGAGGGAACTCACTAAGTTGGAAAACCTCAAGATCTTAGACCTATCAAATAATGATCTGTGTGGTACTTTCCCTACATCCGGCTCTTTTTCCAAGTTCTCTGAACAAAGTTTCAAGAATAACACAAGACTTAAAGGACCAGAATTAATGGGATTCGTCAGATATGATACTGGAGAAAGCTGCAAATGA 663 0.4465 MERSMRVPFYVLAIFLLLSDPFAVINANSEGDALFAFRRAVKDPNNVLQSWDPTLVDPCTWFHVTCDDDKRVTRLDLGHAKLSGHLVPELGRLQRLQFLELYKNDLKGPIPKELGDLKNLVSLGLYQNNLTGSIPASLSNLSHIKFLRLNSNMLTGRIPRELTKLENLKILDLSNNDLCGTFPTSGSFSKFSEQSFKNNTRLKGPELMGFVRYDTGESCK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1410 220 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 10 219 - -
Vra4g1410 220 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Vra4g1410 220 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 10 219 - -
Vra4g1410 220 SUPERFAMILY L domain-like 29 192 - -
Vra4g1410 220 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Vra4g1410 220 Gene3D Ribonuclease Inhibitor 26 209 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1410 Vra-Chr4 20782682 20784609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1410 1 205 Receptor kinase-like Gene Family AT1G71830 58.537 8.94e-75 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1410 - - gmx:100778819 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1410 4 20782682 20784609 Vra4g1410 4 20782682 20784609 ECH