Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1409 ATGAAGAGCTCTCTGAAGAAATTGCGAGGTCTGGCGCTTCACAATCACAACCACAACCGCACTCGCAAGGATGACTCCTCCAACTCCATTCAGCCTTTGGGCCAGCTTGACGAGCTTGCTCGGGCCACCCAGGATATGCAAGACATGAGGGACTGCTATGACACCTTGCTTTCCGCCGCTGCTGCAACCGCCAGCAGTGCCTATGAATTCTCTGAGTCCTTGCGAGACATGGGCTCTTGTCTCCTCGAGAAGACCGCTTTAAATGACCACGCAGATGAAACTGGAAAACTTCTCCTCACGCTTGGCAAAATTCAGTTCAAACTCCACAAACTAATTGATGACTACCGTTCTCATATAATCCAGACAATTACCGTTCCCTCGGAATCTCTCTTGAATGAACTTCGAATTGTTGAGGAGATGAAGCGGCAATGTGATGAGAAAAGAGACGTATATGACTATATGGTAGCAAGATACAGAGAAGGAGGCAGGTCTAAAGGCGGGAAAGGGGAAACTTTTTCTTTGCAGCAGTTGCAAACTGCTCATGATGAATATGATGAAGAGGCTACTTTGTTTGTTTTCCGATTGAAATCTCTGAAGCAAGGACAATCGCGTAGTCTTCTAACACAGGCAACGCGTCACCATGCTTCTCAGTTGTGTTTTTTCAAGAAAGCAGTCAAGTCCCTTGAGACAGTAGAACCACATGTAAAATCTGTAACTGAACAGCAGCACATTGATTACCAGTTCAGTGGTCTTGAAGAGGAGGATGGGTATGAAGGTGACGATGGAGATGATGGTGGTGGTGGTTATGATGACAATGATGATGGTGAGCTGAGTTTTGACTATGGACAAACTGAACAAGACCGAGATGTTTCTACGTCACGAAACTCCATGGAGCTGGATCAAGTGGAAGTTACAGCTCCTGGAGGTTTTACATCCGAAACTGCCAAGGAAAACTTAGACAAACTTCAAAGGAATTTGTTTTCCTTTAGGGTTAGGACAGGGAGCCAATCTGCCCCGCTTTTTGCTGATAAACCTGATGCAATTGAAAAACTGAGGCAGATGCGCCCATCTTTATCTCGGAAGTTTAGTTCATATGTGCTACCCACACCCGTTGATGCTAAGAGTTCAATCTCTTCAAGTTCAAATAATCCAAAACCATCCAAAGTGCAGGCAAATCTAAGTGAACCTACAAAGAACTTGTGGCATTCATCCCCCTTAGAACAAAAGAAACATGAAAAAGATAGCGGTGATGAATTTTCTGGTTCTATTGTCAGAAGTGCTCAGTCGGTACACAAGGAAAGTAACAGTAATACTGCCTCCACGAGATTGCCTCTTCCTCTAGCAGATAATCTTTTATCCTCGAACCGTGATTACATTTCCGCTCACTCTAAAAAGATTAAAAGATATGCCTTTTCTGGCCCATTGACAAGTAATCCTGGGCCTACCAGGCCGGTTTTGTTAGAAAGTGTTCAACTGTTCTCTGGACCTCTTTTGCCAAGTTCAATCCCTCAGCCTCGGTCATCATCTCCAAAAGTATCTCCCACTGCTTCTCCCACTCTAGTGTCTTCACCCAAAATAAGTGAGCTTCATGAACTTCCTAGGCCTCCAACCAATTTCCCATCCAATTCAAGGCTTTTAGGTTTGGTGGGTCATTCTGGTCCTTTGTTGTCTGGAGGTCAAAAGGTTTCCTCTGCAAATAATTTGGCTGCATCAACTGCTGCATCTCCATTACCAATGCCACCTCAGGCCATGGCTCGTAGTTTCTCCATACCTTCTAGTGGGGCTAGAGTTGCAGCATTACATGTTCCTAGAACTCTAGATTCTTCTCATGGATCATCTATATCTGAGACTATTGCTTCTCCTCTGATACCACTAGCATTATCTAGTAGTCAGCCATCATCAGATTGCTGA 1911 0.4464 MKSSLKKLRGLALHNHNHNRTRKDDSSNSIQPLGQLDELARATQDMQDMRDCYDTLLSAAAATASSAYEFSESLRDMGSCLLEKTALNDHADETGKLLLTLGKIQFKLHKLIDDYRSHIIQTITVPSESLLNELRIVEEMKRQCDEKRDVYDYMVARYREGGRSKGGKGETFSLQQLQTAHDEYDEEATLFVFRLKSLKQGQSRSLLTQATRHHASQLCFFKKAVKSLETVEPHVKSVTEQQHIDYQFSGLEEEDGYEGDDGDDGGGGYDDNDDGELSFDYGQTEQDRDVSTSRNSMELDQVEVTAPGGFTSETAKENLDKLQRNLFSFRVRTGSQSAPLFADKPDAIEKLRQMRPSLSRKFSSYVLPTPVDAKSSISSSSNNPKPSKVQANLSEPTKNLWHSSPLEQKKHEKDSGDEFSGSIVRSAQSVHKESNSNTASTRLPLPLADNLLSSNRDYISAHSKKIKRYAFSGPLTSNPGPTRPVLLESVQLFSGPLLPSSIPQPRSSSPKVSPTASPTLVSSPKISELHELPRPPTNFPSNSRLLGLVGHSGPLLSGGQKVSSANNLAASTAASPLPMPPQAMARSFSIPSSGARVAALHVPRTLDSSHGSSISETIASPLIPLALSSSQPSSDC* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1409 636 MobiDBLite consensus disorder prediction 372 446 - -
Vra4g1409 636 MobiDBLite consensus disorder prediction 404 419 - -
Vra4g1409 636 MobiDBLite consensus disorder prediction 421 446 - -
Vra4g1409 636 MobiDBLite consensus disorder prediction 498 524 - -
Vra4g1409 636 MobiDBLite consensus disorder prediction 252 314 - -
Vra4g1409 636 SUPERFAMILY BAR/IMD domain-like 38 237 IPR027267 -
Vra4g1409 636 MobiDBLite consensus disorder prediction 1 16 - -
Vra4g1409 636 MobiDBLite consensus disorder prediction 498 539 - -
Vra4g1409 636 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 635 IPR037488 -
Vra4g1409 636 MobiDBLite consensus disorder prediction 372 403 - -
Vra4g1409 636 MobiDBLite consensus disorder prediction 1 31 - -
Vra4g1409 636 MobiDBLite consensus disorder prediction 252 280 - -
Vra4g1409 636 CDD BAR 68 234 - -
Vra4g1409 636 Gene3D Arfaptin homology (AH) domain/BAR domain 34 254 IPR027267 -
Vra4g1409 636 PANTHER BNAA05G10100D PROTEIN 1 635 - -
Vra4g1409 636 MobiDBLite consensus disorder prediction 284 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1409 Vra-Chr4 20777091 20782175 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1409 - - vun:114183484 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1409 4 20777091 20782175 Vra4g1409 4 20777091 20782175 ECH