Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1405 ATGCTTATCACTCACCATACTTTGGCATTTGCATTTGGCATGCTGGGTAATGTCATTTCGTTCTTGGTATTCTTGGCTCCAGTGCCAACATTTTACCGGATATACAAGAAGAAATCAACGGAAAGTTTTCAGTCATTGCCTTACTTAGTAGCATTATTCAGTTCAATGCTTTGGTTGTACTATGCATGGCTGAAAAAAAATGCTGTTCTCCTAATCACCATTAACTCATTCGGATGTGTCATAGAGATCATCTACATCGTCTTGTACATCACCTATGCAACCAGGGATGCTAGGAACTTGACCATCAAGCTATTTTCGGCGATGAACATGGGCTCCTTTGCTTTGATATTGATAGTCACAAACTTTGTCGTGCATGGTCCCCTTCGTGTGCAAGTTCTGGGATGGATTTGTGTTTCCATTTCAGTCAGTGTATTTGCAGCACCACTCAGCATTGTGGCGCAAGTTGTTCGCACGAAGAGTGTAGAGTTTATGCCTTTCAATTTGTCATTTACCCTTACATTGAGCGCCATAATGTGGTTTGGTTATGGTCTCTTTCTGAAGGACATATGCATCGCTCTCCCGAATGTGCTTGGTTTTGTGCTGGGGTTGCTTCAGATGGTGCTGTACGGAATTTACAGAAAAGGAAATAAAAAGAGTAATAAAATGGAAAAGAATCCAGAAGAGGCACTGAAGAACATTGTTGTAGCGAGCCCGTTGGGAGCTGGAGAGGTGTTTCCCGTGGAGGAAGATGAAGAAGCCAAAAAGAGCCATTACGAGGAAAAGAAACAAGAGTGCGAGGTCTGA 804 0.4266 MLITHHTLAFAFGMLGNVISFLVFLAPVPTFYRIYKKKSTESFQSLPYLVALFSSMLWLYYAWLKKNAVLLITINSFGCVIEIIYIVLYITYATRDARNLTIKLFSAMNMGSFALILIVTNFVVHGPLRVQVLGWICVSISVSVFAAPLSIVAQVVRTKSVEFMPFNLSFTLTLSAIMWFGYGLFLKDICIALPNVLGFVLGLLQMVLYGIYRKGNKKSNKMEKNPEEALKNIVVASPLGAGEVFPVEEDEEAKKSHYEEKKQECEV* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1405 267 Gene3D - 11 99 - -
Vra4g1405 267 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 15 261 - -
Vra4g1405 267 Pfam Sugar efflux transporter for intercellular exchange 11 95 IPR004316 GO:0016021
Vra4g1405 267 Pfam Sugar efflux transporter for intercellular exchange 131 214 IPR004316 GO:0016021
Vra4g1405 267 PANTHER RAG1-ACTIVATING PROTEIN 1 15 261 - -
Vra4g1405 267 Gene3D - 129 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1405 Vra-Chr4 20731865 20734154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1405 1 267 Miscellaneous Gene Families AT5G13170 66.052 9.84e-125 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1405 K15382 - gmx:100779335 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1405 4 20731865 20734154 Vra4g1405 4 20731865 20734154 ECH