Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1357 ATGAATTGTTATAATCTTCATCAGAATGCCTTCTCAGCACGTGAAGAGATGAGGGGCTCTCTTTCCATTGCTGATCAGAATGGCCCTGTATTTTGCCCTAAGCCACGCCGAGCTGGAGTTTTAATGAACTTGCCTATTCGACCAGTGAAGTGGCATTTTGGCCAACAAGCTGAGGGCTCTGATTCAAAAGCTGGGGCAGAACTACTTGACATTGTTCTTAAGAGGGAGAGTTACTGGGATGATTTTTCCAACCAGATACCTTCCTCTCCTCCCTATTTTTGTGGTTCTCCTCCAGTTCGGGCTGCGAATCCCTTGATCCAAGATGCTCGCTTTGGAGATGAAGAGAACAGTCTTGCATCAACAGTTTCCTCGCCTTCTGGTTTGCTATCTCCATCTTCAGCATCTCGCAAAGGAGGATGTGCTAGGATGAAGTTTGGACTTAAACCAGCTGCAGTTAGAGTAGAAGGATTTGATTGCCTCAGCAGGGATTGTCAGAATTCTGGCATCCCTGCTGTTGCCTAA 522 0.4655 MNCYNLHQNAFSAREEMRGSLSIADQNGPVFCPKPRRAGVLMNLPIRPVKWHFGQQAEGSDSKAGAELLDIVLKRESYWDDFSNQIPSSPPYFCGSPPVRAANPLIQDARFGDEENSLASTVSSPSGLLSPSSASRKGGCARMKFGLKPAAVRVEGFDCLSRDCQNSGIPAVA* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1357 173 PANTHER EXPRESSED PROTEIN 1 173 - -
Vra4g1357 173 PANTHER BNAC02G06400D PROTEIN 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1357 Vra-Chr4 20268537 20270845 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1357 - - gmx:100807321 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1357 4 20268537 20270845 Vra1g0601 1 6997572 6999466 ECH
Vra4g1357 4 20268537 20270845 Vra4g1357 4 20268537 20270845 ECH
Vra8g2562 8 43560869 43562717 Vra4g1357 4 20268537 20270845 ECH
Vra1g1145 1 14482430 14484761 Vra4g1357 4 20268537 20270845 PCT