Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1246 ATGCCTCCTCTTCCCACTTTTCTCATCCAACTCTACTTCAAACACTTGATTCCTTTTCTTACAAGAATAATGCATTACCAAGTGGAGCCTGCTGCTGCTGCATGGAACTACCTCATCAGGGTTCGGACCATGGAAGAAGACCAAATGGAGAGAGTGGTTAGGCTCGCCTCTCAGAGTGCTGTGGTGATTTTCAGTGTAAGTAGCTGTTGCATGTGCCATGCAATGAAGAGGCTCTTCTGTGGCATGGGGGTTAACCCCACTGTTCATGAGCTTGACCAAGACCCCAAAGGAAAAGACATGGAGAGAGCACTGATGAGGCTTCTTGGAAATGGAATCAACACCACTGCTGCAGTTGTTCCTGTCGTCTTCATTGGAGGAAAACTTGTTGGTTCCATGGACAGGGTTTTGGCTTTCCACATCAGTGGCACCCTTGTCCCTCTTCTCAAACAAGCTGGAGCTTTGTGGCTTTGA 471 0.4798 MPPLPTFLIQLYFKHLIPFLTRIMHYQVEPAAAAWNYLIRVRTMEEDQMERVVRLASQSAVVIFSVSSCCMCHAMKRLFCGMGVNPTVHELDQDPKGKDMERALMRLLGNGINTTAAVVPVVFIGGKLVGSMDRVLAFHISGTLVPLLKQAGALWL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1246 156 ProSiteProfiles Glutaredoxin domain profile. 49 155 - -
Vra4g1246 156 PANTHER GLUTAREDOXIN-C1 PROTEIN 23 155 - -
Vra4g1246 156 Pfam Glutaredoxin 61 129 IPR002109 -
Vra4g1246 156 SUPERFAMILY Thioredoxin-like 49 155 IPR036249 -
Vra4g1246 156 PANTHER GLUTAREDOXIN 23 155 IPR011905 -
Vra4g1246 156 Gene3D Glutaredoxin 42 155 - -
Vra4g1246 156 CDD GRX_GRXh_1_2_like 60 147 - -
Vra4g1246 156 TIGRFAM GlrX-like_plant: glutaredoxin-like family 52 156 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1246 Vra-Chr4 19426809 19428312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g1246 51 156 Miscellaneous Gene Families AT3G02000 68.868 1.88e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1246 K03676 - gmx:100797942 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1246 4 19426809 19428312 Vra4g1246 4 19426809 19428312 ECH