Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1245 ATGAGTAAGGATGACGTGTTGGAATACGAAATACATTCGGGATTCTTCTACTTGGATGGTTATGTAGAAGTTATTGTTCTTCTCCTGAAACTTCTGGAACTTTCATTTTTTCCACTGTTGTCCTGTCTGATGAAGAACACCTCTTTTGAAAGAACTCCCTGGGGCATGGTTGAGCCAAGGTATTACAAAGCACCATCTAAGGTGGTTTCGATTCCTGTTCGCTTCGTGGGTTCAGAGCGCAGCAGAGCCGATTCTGCCATAAAGATTCAAAGGGTGTTGAGAGGGTTTCTGGTGAGGAAGACGCTGAAGAAGATCGCGGCCATGAGGGTGGAGTTGGCACAGATTGAGAGCGAGATTCGGGTTGAAGTGGTGAAGAGGGAACCGAAAGAGAGGATGAGGGTGATCGAGACCATCATGAACTTGCTTCTGAAGTTGGATTCGGTTCGGGTATTGCACTACTCTGGCCTCAGGGAGTGCAGAAAGTCTGTTATCAGAAAAGCTATTGCCCTTCAGGAAATGCTTGATCAAATGGGTGTCGCTGATTCTGATGAGGGCGTGAAATCGGAAAAGAAGGAGGAAGAATGGAATTGTTTGGTGAAGGAAGAAGAAGAAGAAGAAGAAGATAGTGGAATGGAAAATTTGAGGAATGAGGAAGATGATGATGAAGTTGAGGAAATTGAAGGTATGAGGAATGAGGAGGTGCAAGATAAGGAAAGTGTTTTGGTGAAAGAGGAGGAAGGAGATAGGAAGAAGAAGGAGTTGTTGATGGAGACGATGGTGGAAGATAACCACAAGATGATAGAGATGATGGCGCAACTGTTTCAGAGGAATGAATTGCAGACTTCACTTCTGACCTCTCTATCACAGAGGGTGGAGCAGCTTGAGAGAGTCATGGCTTCTGAGAAGTTGAGGAGGAAGAAAAAGGGAAAGACTTGTAGAAAAAATAAACAAACTCATCTCAGAAATTGCTTCGTCTGA 978 0.4438 MSKDDVLEYEIHSGFFYLDGYVEVIVLLLKLLELSFFPLLSCLMKNTSFERTPWGMVEPRYYKAPSKVVSIPVRFVGSERSRADSAIKIQRVLRGFLVRKTLKKIAAMRVELAQIESEIRVEVVKREPKERMRVIETIMNLLLKLDSVRVLHYSGLRECRKSVIRKAIALQEMLDQMGVADSDEGVKSEKKEEEWNCLVKEEEEEEEDSGMENLRNEEDDDEVEEIEGMRNEEVQDKESVLVKEEEGDRKKKELLMETMVEDNHKMIEMMAQLFQRNELQTSLLTSLSQRVEQLERVMASEKLRRKKKGKTCRKNKQTHLRNCFV* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1245 325 SUPERFAMILY BAG domain 100 176 IPR036533 GO:0051087
Vra4g1245 325 Coils Coil 98 118 - -
Vra4g1245 325 SMART BAG_1 101 178 IPR003103 GO:0051087
Vra4g1245 325 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 191 311 - -
Vra4g1245 325 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 63 237 - -
Vra4g1245 325 MobiDBLite consensus disorder prediction 202 223 - -
Vra4g1245 325 Pfam IQ calmodulin-binding motif 84 103 IPR000048 GO:0005515
Vra4g1245 325 ProSiteProfiles IQ motif profile. 82 111 IPR000048 GO:0005515
Vra4g1245 325 Coils Coil 200 220 - -
Vra4g1245 325 Gene3D BAG domain 94 183 IPR036533 GO:0051087
Vra4g1245 325 ProSiteProfiles BAG domain profile. 101 178 IPR003103 GO:0051087
Vra4g1245 325 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 191 311 IPR040400 -
Vra4g1245 325 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 63 237 IPR040400 -
Vra4g1245 325 Pfam BAG domain 120 176 IPR003103 GO:0051087
Vra4g1245 325 Coils Coil 284 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1245 Vra-Chr4 19424370 19425426 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1245 - - vra:106758498 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1245 4 19424370 19425426 Vra4g1245 4 19424370 19425426 ECH