Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1221 ATGTACCAGAAAGCTACCTGGCTCCCTTATCCTGCGCACACCGCCCCTGCCACTGTAACCACAATGGCCGAAGAGCCCGAAACTAACCCACCACCGCCGGACCCTCCAATTCCCTCTGCACCGGAGGTTGAGGCGGAGACGGCTCCTCCGGCTGCAGCAACTGCATCGCAGCCGAGCATCGAGATCGCCGCCCCTCCGGCGTTAGCTCCGAAGCGGCAACGCCGTCCGAGCGTCCGTCTAGGAGAGATCGGCGACCAGCGCGCCGCCTTACATGGCCACGACTCACATACGCGCCGCCCGAGCATGCCGCCATGGAGCTGGCGGACTCCGAAGGAATCTTCAAGAACTTCGAAGGCGCGCTCCGTCACGAACATCGCGAACGGCGGCGAAGAGTTCGGAAGCACCAACAACCGTAGGGGAAAGGCGAAGCGAGGAGGACCAACAGCGAAGCGGTTGAGATCAAACTGGACTCCGCGAGCAACGATGGATGAAAACGGTGAGGAAGAAGGTTTTAGGGATTTCGAACATGAACTTGAACAGGATCAGAGTCCGGTGCACTCGGTGGAAGATAACGGTGTGGATTATTGGCACGTGGATCGGAGCGAGGATCCTAGAGTTAGGGTTTCGGATAACGACGGCGTTGAATCGGAATCGCGGGAACGGAGGAAGAGCGACGGAGTTAGGTCTTGGCTTTTCGAGTTAGGTCTGAGTAGGTATGCGCCTATGTTTGAGATCCATGAGGTCGATGATGAGTTGCTTCCTATGTTGACATTGGAGGATCTCAAAGATATGGGGATCAACGCTGTCGGGTCCAGAAGGAAAATGTACAATGCAATCCAGAAGCTGAGGAAGTGCTTTCCGTGA 864 0.5683 MYQKATWLPYPAHTAPATVTTMAEEPETNPPPPDPPIPSAPEVEAETAPPAAATASQPSIEIAAPPALAPKRQRRPSVRLGEIGDQRAALHGHDSHTRRPSMPPWSWRTPKESSRTSKARSVTNIANGGEEFGSTNNRRGKAKRGGPTAKRLRSNWTPRATMDENGEEEGFRDFEHELEQDQSPVHSVEDNGVDYWHVDRSEDPRVRVSDNDGVESESRERRKSDGVRSWLFELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMGINAVGSRRKMYNAIQKLRKCFP* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1221 287 MobiDBLite consensus disorder prediction 1 168 - -
Vra4g1221 287 SMART SAM_4 219 285 IPR001660 GO:0005515
Vra4g1221 287 MobiDBLite consensus disorder prediction 75 98 - -
Vra4g1221 287 MobiDBLite consensus disorder prediction 26 43 - -
Vra4g1221 287 SUPERFAMILY SAM/Pointed domain 225 284 IPR013761 -
Vra4g1221 287 Pfam SAM domain (Sterile alpha motif) 225 283 IPR001660 GO:0005515
Vra4g1221 287 Gene3D - 221 282 IPR013761 -
Vra4g1221 287 PANTHER SCP160 25 287 - -
Vra4g1221 287 CDD SAM_superfamily 227 281 - -
Vra4g1221 287 ProSiteProfiles SAM domain profile. 222 285 IPR001660 GO:0005515
Vra4g1221 287 MobiDBLite consensus disorder prediction 107 134 - -
Vra4g1221 287 PANTHER PROTEIN BICAUDAL C HOMOLOG 1-A-LIKE 25 287 - -
Vra4g1221 287 MobiDBLite consensus disorder prediction 180 220 - -
Vra4g1221 287 MobiDBLite consensus disorder prediction 192 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1221 Vra-Chr4 19166768 19168017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g1221 - - vra:106758807 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1221 4 19166768 19168017 Vra4g1221 4 19166768 19168017 ECH