Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0857 ATGTGGGGCACAATCGCCAACTTCAAGGAGAATTTGAACAAGATCGCCCTCGACGTTCATTACGCCCACGATGACGACGACGACGACGACGACAACGACCAACACCACGTCGTTAGCCCCGCCGTCTCCGATCGCCGCAATTCTCACACCTTTGCCCATTCCAATTCGTTTCCCAGCTCTCCGCCGCCCAATGGAATGTCCGATCACCCCTACGCTTCTGAGATAGAACAATATAAAGCAGAAATCAAGAGACTTCAAGCTTCTGAGGCAGAAATTAAAGCACTATCGGTTAATTATGCAGCTATATTAAAAGAAAAAGAGGATCATATTGTTAGATTGAATAAAGAAAATGGCTCATTAAAACAGAATTTGGATACAAGTCCCGTATCTGCAAATGGTGGTTACACAGTCAAGGGAAATAGTGACCTGTCATCCAATCGACAGCATTGGTTCACAACTCAAATGAAAAATCTTTATGCTACAAACAATGGAACCACATCTTCTTTGGAATCCGATGGTATTCAAACCAAGACGGTATCTAAGCACTCAAACTCACGAGTAAAGGACAAGGAGCTAGCAGATATGGTAGAGGGAAAAAGTAGCCCAGCAGCAGCAGTACAACATTCCGCTGATATACATAAAATGAAGTTGGAACTAGAGCAAGAACAGAATAAAATGGCACATATGCAGCTTAAATTACAGGAGGAAGAGAAATTGAACAAGTCATTCCAAGAGGAGCTTAAATTATTGAAGTTGGAAAGAGACAAAACAACATATGAGATGAGCAAATTACACAATGAATTGAATGGGAAAATATCAGAAATTAATCGCCTGCAAATGGAGTTGAGTAGACAGGAAGATGAAGAAACAAGTGACGTGGATAGCTTCAAGAGACTTATTGAATCTCTGGAGAAGGAAAACACTACTCTTAAGTTGGAAAAGGATGAACTTGAGGCTGAGGTCAAATCAATTAGGACTTCTGGTAAAATATCACCTGATGCTTCTCAGATCCAGAAAAGGATTCCAAGCTTTAACAATCATGTGAGCCAAAACTTACCAGATCCTTCCAAAAGTTTTCCAAGGAATGAAGAGTTGGAAAGATCCTTACATAAGCTAAGTGAAGAACTGGAGGAAACACAAAAGGGAAATGAAGAGTTGGAAAGATCCTTACTTAAGCTAAGTAAAGAATTGGAGGAAACACAGAAGGAAAGGGACAAAGCAGTACAACAATTGACCCGTCTTAAACAGCATTTGTTAGAAAAGGAATCTGAAGATTCCGAAAAAATGGACGAGGACAGCAAAATAATTGAAGAACTTCGTGACAGCAATAATTATTTGAGGGCTCAAATATCCCATCTTGAGAGAACTCTAAAACAGGGAACTGCGAGTCAGGAGAAACTGAAGATGGAAAATGACAATGAAATTCTCAAATCCAGGGAAATCATTGATGAGCTGAACAAGAAGCTGACTGACTGTATGAGCACAATAGATGCTAAGAATACAGAACTTCTAAATCTACAGACAGCTCTTGGACAATATTATGCCGAAATTGAAGCTAAGGAACATTTAGAAGGAGATCTGGCTCGTGCAAAGGAAGAAAACTCTAAGCTTTCTCTACTGTTGAAAGATGCACAATGCAGAGCAGATGTCTTCATCAGTGAAAAAGAAGAAATTTTAGCTAAGCTTTCTAAATCTGAAAAGCTACAATCAGAATGGAGAAGTAGAGTAAGCAAGCTCGAAGAAGACAATTCCAGGTTGAGGCGAGCGGTTGAACAGAGTATGACCAGGCTAAATAGAATGTCAGTGGATTCAGATTTTCTTGTTGACAGGCGCATTGTGATAAAATTACTTGTTACTTATTTCCAGAGAAACCACAGTAAAGAGGTTTTGGATCTAATGGTTCGCATGCTGGGATTCTCTAATGAGGACAAACAAAGAATAGGTGTTGCTCAACAAGGTCCAGGAAAAGGCGTTGTCCGCGGTGTTCTTGGGTTGCCTGGCCGCCTAGTTGGAGGTATCTTGGGAGGTGGTGGTTCCACTGAATCAGCTGCAAATGCGGGAGCAGATAACCAGTCCTTTGCAGATCTGTGGGTTGATTTTCTTCTCAAGGAAACAGAAGAAAGAGAGAAGAGGGAGTCAGCAGGAACTAGAGATAAATCCATGGATGATTCGCATGATAGAAGTTATACTAATTCATCTCCACCACATTCCAATCAAAGGTTTAGGACTGGAACAGTACCAATTAGCTCATCCACAAATCAAAACATCAGTTCTCTCCCTCGTGGATACTTTCAGCACTCCGAACAACTTGGTTCCGAGTTCTCAACAGTTCCCCTTACATCTTCTTCATCAGATAGTTCAAAACTTCTTCCCAGATACTAA 2382 0.4085 MWGTIANFKENLNKIALDVHYAHDDDDDDDDNDQHHVVSPAVSDRRNSHTFAHSNSFPSSPPPNGMSDHPYASEIEQYKAEIKRLQASEAEIKALSVNYAAILKEKEDHIVRLNKENGSLKQNLDTSPVSANGGYTVKGNSDLSSNRQHWFTTQMKNLYATNNGTTSSLESDGIQTKTVSKHSNSRVKDKELADMVEGKSSPAAAVQHSADIHKMKLELEQEQNKMAHMQLKLQEEEKLNKSFQEELKLLKLERDKTTYEMSKLHNELNGKISEINRLQMELSRQEDEETSDVDSFKRLIESLEKENTTLKLEKDELEAEVKSIRTSGKISPDASQIQKRIPSFNNHVSQNLPDPSKSFPRNEELERSLHKLSEELEETQKGNEELERSLLKLSKELEETQKERDKAVQQLTRLKQHLLEKESEDSEKMDEDSKIIEELRDSNNYLRAQISHLERTLKQGTASQEKLKMENDNEILKSREIIDELNKKLTDCMSTIDAKNTELLNLQTALGQYYAEIEAKEHLEGDLARAKEENSKLSLLLKDAQCRADVFISEKEEILAKLSKSEKLQSEWRSRVSKLEEDNSRLRRAVEQSMTRLNRMSVDSDFLVDRRIVIKLLVTYFQRNHSKEVLDLMVRMLGFSNEDKQRIGVAQQGPGKGVVRGVLGLPGRLVGGILGGGGSTESAANAGADNQSFADLWVDFLLKETEEREKRESAGTRDKSMDDSHDRSYTNSSPPHSNQRFRTGTVPISSSTNQNISSLPRGYFQHSEQLGSEFSTVPLTSSSSDSSKLLPRY* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0857 793 PANTHER MYOSIN HEAVY CHAIN - RELATED 382 793 - -
Vra4g0857 793 PANTHER MYOSIN HEAVY CHAIN - RELATED 1 381 - -
Vra4g0857 793 MobiDBLite consensus disorder prediction 26 70 - -
Vra4g0857 793 Coils Coil 520 547 - -
Vra4g0857 793 MobiDBLite consensus disorder prediction 343 357 - -
Vra4g0857 793 MobiDBLite consensus disorder prediction 343 362 - -
Vra4g0857 793 Coils Coil 362 424 - -
Vra4g0857 793 Coils Coil 261 327 - -
Vra4g0857 793 MobiDBLite consensus disorder prediction 707 793 - -
Vra4g0857 793 Coils Coil 205 253 - -
Vra4g0857 793 MobiDBLite consensus disorder prediction 43 62 - -
Vra4g0857 793 Coils Coil 569 596 - -
Vra4g0857 793 Coils Coil 436 456 - -
Vra4g0857 793 MobiDBLite consensus disorder prediction 122 141 - -
Vra4g0857 793 PANTHER VESICLE TETHERING-LIKE PROTEIN, PUTATIVE-RELATED 1 381 - -
Vra4g0857 793 PANTHER VESICLE TETHERING-LIKE PROTEIN, PUTATIVE-RELATED 382 793 - -
Vra4g0857 793 MobiDBLite consensus disorder prediction 707 726 - -
Vra4g0857 793 Coils Coil 75 123 - -
Vra4g0857 793 MobiDBLite consensus disorder prediction 727 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0857 Vra-Chr4 15651719 15665043 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0857 - - gmx:100794376 1096.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0857 4 15651719 15665043 Vra4g0857 4 15651719 15665043 ECH
Vra9g0501 9 5293769 5305582 Vra4g0857 4 15651719 15665043 PCT