Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0682 ATGGCGAATCATGTCTCAGTTATCAACTCTTCCTACTGTTCTGCTGACTCCATCACTCTACAGATTAATACTGAGAAAGGAGAGACTTACAATGAAAACGATGATCGTCTCTTTTATATGGACGATACTTTTTTCACACTTCACAACCGTCGTGTCTTATATGATGATACAAAAAAACCCATCGTCACCTTCTACAGAAAGGCTGTGACGTTGCATGAGCGATGCAAAGTTTTCAAGGGTGAAAGCACTGATTCATCTCAATTGCTATGCTCTGTGGAGAAAATCAATAATAAATCGATCCCACCTGGAATTACTAAATTAAACGTGTTCCTTGCAAAAAACCAAGAGAAAAAGAAAAGTGACTTTAGAGTCATCGTTTCTGGTATTCAAAGCTCCTGTACAGTTTATATCGGTGAATCTCCTAATATTATAGCTAAGGTGGAGAATAATGGTGGCTTCAATGTCATGGTGTATCCTAACGTGGACTACGCATTCATAGTTGCACTACTTATGATTGTTAAGGATATGAAATTCTCTAATGGGTCCACTGATAGTACACAAAACAGTATTGCTTTATCGTTATCGCTTTGA 591 0.3773 MANHVSVINSSYCSADSITLQINTEKGETYNENDDRLFYMDDTFFTLHNRRVLYDDTKKPIVTFYRKAVTLHERCKVFKGESTDSSQLLCSVEKINNKSIPPGITKLNVFLAKNQEKKKSDFRVIVSGIQSSCTVYIGESPNIIAKVENNGGFNVMVYPNVDYAFIVALLMIVKDMKFSNGSTDSTQNSIALSLSL* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0682 196 Pfam LURP-one-related 7 172 IPR007612 -
Vra4g0682 196 Gene3D - 5 179 IPR038595 -
Vra4g0682 196 SUPERFAMILY Tubby C-terminal domain-like 7 177 IPR025659 -
Vra4g0682 196 PANTHER PROTEIN LURP-ONE-RELATED 13 3 177 - -
Vra4g0682 196 PANTHER - 3 177 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0682 Vra-Chr4 12753844 12798093 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0682 - - vra:106758374 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0682 4 12753844 12798093 Vra9g1124 9 14907545 14908745 PCT