Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0617 ATGATGAGTGGGAGGAATGTGAGAGAGTCTCTTCTGGGATCTCTCAACAATCACCGTCGAGGGCATAGCTTCAATGGGGTGGCCAACAACAACCACGATGACAACCTCGATCTTTTCTCCAACAACCGTCGCTCCCTCTCTCTTGCTTCTTCTGATGAATCTTCTGATGTTTCGGTGAAACTGGGGAGGCTCTCAGTTGGAACAGCAAAACCGGTTAGAAGTGGGATTGATGATCTGTTATCATCTGCAGAAGGAGGGAAGCATGATTATGACTGGCTTCTCACTCCCCCGGGAACCCCTGTTTTTCCATCAGAAGGAGAATCCCAATCAACCCTAGTTCCTCCAAGGAGAAGTTTGACTAGATCAACATCTACCTCTAAGGCCTCAAGGCTTGCAGTCTCACAATCAGAGAACAGCAATCCTTCTAGACCAGCAAGAAGCAGTTCTGTGACTCGCTCTTCCATCTCTACTTCACACTCACAATACAGCTCCTATTCTTCAAACAGAAACTCCTCTTCAATCCTCAACACAAGTTCAGCCTCAGTTTCATCTTACATAAGACCATCTTCCCCAGTAACTCGATCTTCATCGGCATCAAGGCCGTCCACTCCCTCCTCTCGCCCCACAGTATCACGGTCCTCAACACCCTCCAAACCACGTCCAGTTTCCACCAACTCCACTGCTGAAAGGCATAGACCATCATCTCAAGGCTCAAGACCATCCACACCTAGTTCTAGGCCTCACATTCCTGCAAACTTGCATTCTCCAGCTGCTCCACCAACTCGGTCACTGTCTCGGCCTTCCACTCCCACACGTAGGAGCTCAATGCCATCTTTATCTACTTCTCCTTCCCCTACACCGGGTTCTCTGTCTTCATCTAGCCGCGCTTCATTGAATGGACGCAGTTCAGCACCTTCATCAAGGCCAAGCTCACCAAGCCCACGAATTAGGCCTCCACCACAGCCAATTGTTCCTCCTGATTTCCCCCTTGATACACCACCAAACCTTAGAACAACATTGTCTGATAGGCCTGTTTCTGCAGGAAGGTCACGTCCTGGTGGTACCTCGTTGAAGGCAAATGGTTCTGAAACTCAAGCCTCCTCCATTACTAATCCAAGGAGACATTCATCTCCTGTTGTTAGCAGAGGGAGAGTGACAGAACCTTTGGCAAAAAGCCGTGGCTATGCCAATGGCCATCATGCTGATGCTCCTGAGCCTAGGAAAGTCTCACATACTCCTGAGCTTGCTGCAAGGAAATCTGTTAAGGCTTCAACTACTGGCACTGAAAATAATGGATTTGGGAGGACTATCTCAAAGAAATCCCTGGACATGGCTATTAAGCACATGGATATAAGGAACGGCTCGGGAAATATCCGTTCACTATCAAACACCACACTCTTCCCTCAGAGTATTAGAACTTCCACTCCTAGGAGCCAGTCTCATCGAGTTTCGAGTGCTCCAGCATCTGTAGACATGAATGGAAGCCTGCTAAGCAGCAGTAACAATGGATCCAATTTTGATATGGGAAATGGTATCAGTAATAGGAGTATGATGAAAGCTAGAGAGGTAGATGAAAGACAATATTCTGCAAGAGTGAGTGAAGTAGACATCTATGAGAGTTCTCGTTATGATGCACTGTTGTTCAAAGAAGATTTGAAGAACACAAACTGGCTGCATGGTGTTGATGATAAGTGTGATCAAGGCCCCATATTTGATAACGGATTTGAGCACCTGCCAGAACCTTTTGGCCTCTTATAA 1758 0.4727 MMSGRNVRESLLGSLNNHRRGHSFNGVANNNHDDNLDLFSNNRRSLSLASSDESSDVSVKLGRLSVGTAKPVRSGIDDLLSSAEGGKHDYDWLLTPPGTPVFPSEGESQSTLVPPRRSLTRSTSTSKASRLAVSQSENSNPSRPARSSSVTRSSISTSHSQYSSYSSNRNSSSILNTSSASVSSYIRPSSPVTRSSSASRPSTPSSRPTVSRSSTPSKPRPVSTNSTAERHRPSSQGSRPSTPSSRPHIPANLHSPAAPPTRSLSRPSTPTRRSSMPSLSTSPSPTPGSLSSSSRASLNGRSSAPSSRPSSPSPRIRPPPQPIVPPDFPLDTPPNLRTTLSDRPVSAGRSRPGGTSLKANGSETQASSITNPRRHSSPVVSRGRVTEPLAKSRGYANGHHADAPEPRKVSHTPELAARKSVKASTTGTENNGFGRTISKKSLDMAIKHMDIRNGSGNIRSLSNTTLFPQSIRTSTPRSQSHRVSSAPASVDMNGSLLSSSNNGSNFDMGNGISNRSMMKAREVDERQYSARVSEVDIYESSRYDALLFKEDLKNTNWLHGVDDKCDQGPIFDNGFEHLPEPFGLL* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0617 585 PANTHER GASTRIC MUCIN-LIKE PROTEIN 17 585 - -
Vra4g0617 585 MobiDBLite consensus disorder prediction 258 310 - -
Vra4g0617 585 PANTHER GASTRIC MUCIN-LIKE PROTEIN 17 585 - -
Vra4g0617 585 MobiDBLite consensus disorder prediction 398 415 - -
Vra4g0617 585 MobiDBLite consensus disorder prediction 311 332 - -
Vra4g0617 585 MobiDBLite consensus disorder prediction 102 249 - -
Vra4g0617 585 MobiDBLite consensus disorder prediction 471 493 - -
Vra4g0617 585 MobiDBLite consensus disorder prediction 419 435 - -
Vra4g0617 585 MobiDBLite consensus disorder prediction 90 435 - -
Vra4g0617 585 MobiDBLite consensus disorder prediction 353 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0617 Vra-Chr4 11643495 11648452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0617 - - gmx:100797203 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0617 4 11643495 11648452 Vra4g0617 4 11643495 11648452 ECH
Vra4g0617 4 11643495 11648452 Vra9g0655 9 7499885 7503172 PCT