Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0610 ATGGCTGCCATGGGTATGTTGTGTTTGTCTCCACTATCAGGTCAACAACAAGCACTTTCTTTCCCATCATTGCCATCTACATCGCCTAAACTTCAGAATCGTCCTCTGTATCTCACCAATTTACCTCATTTTCCTCAAAGGCTGAGGCCTTCCTTCGCCAGAGGGGACGGCGGAAGTGGGGTCGGGCGTGGTGGGGGTGGTGGTGGTGGAGGTGGAGGTGACGACGGAGATTCCAAAGATTCTTCTTTTGGGATTTTGGGTCTCTTTCTGAACGGGTGGAGATCAAGGGTTGCTGCTGATCCACAATTTCCCTTCAAGGTTTTGATGGAAGAGCTGGTGGGTGTGAGTGCTTGTGTTTTAGGTGACATGGCTTCAAGGCCTAATTTTGGGTTGAATGAACTTGACTTTGTCTTTTCAACTTTGGTTGTTGGGGCTATTCTGAATTTCACTCTGATGTATCTGTTGGCACCTACCATGACATCATCAGCATCGAGCGTACCTGGCATATTTGCCTCATGCCCCAAGAGTCACATGTTTGAGCCTGGTGCTTTTTCCCTTCTTGATAGATTTGGAACCTTGGTGTACAAAGGAACCATTTTTGCTGTTGTCGGTTTTGGTGCTGGACTAGTTGGAACCACACTTTCCAATGGGTTGATCAGTATGAGGAAGAAGATGGATCCAACCTTTGAGACACCTAACAAGCCCCCACCTACCCTTTTGAATGCTCTGACATGGGCAGGTCACATGGGGGTTAGCAGCAACCTGAGGTATCAGACTCTGAATGGTGTTGAGTTCATGCTGGAGAGAGTGCTTAACCCTTTGGCCTTCAAGTCCTCAGTGTTGGTTCTGAGGTGTGTGAATAATGTTCTTGGGGGCATGTCCTTTGTGGTGTTGGCAAGGCTAACTGGGGCACAGAGTGTTGGGGAGAAGAAGGAAAATGAGGTTGCTCTGATTTCTGAGAAAGAGAAGGTGGAATCGTCGGAGAGGGAAGAGGGGTTGCAGAATCAGTCGACAGAACCATCAAAGTGA 1029 0.482 MAAMGMLCLSPLSGQQQALSFPSLPSTSPKLQNRPLYLTNLPHFPQRLRPSFARGDGGSGVGRGGGGGGGGGGDDGDSKDSSFGILGLFLNGWRSRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGAILNFTLMYLLAPTMTSSASSVPGIFASCPKSHMFEPGAFSLLDRFGTLVYKGTIFAVVGFGAGLVGTTLSNGLISMRKKMDPTFETPNKPPPTLLNALTWAGHMGVSSNLRYQTLNGVEFMLERVLNPLAFKSSVLVLRCVNNVLGGMSFVVLARLTGAQSVGEKKENEVALISEKEKVESSEREEGLQNQSTEPSK* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0610 342 Pfam Protein RETICULATA-related 96 263 IPR021825 -
Vra4g0610 342 MobiDBLite consensus disorder prediction 52 76 - -
Vra4g0610 342 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 55 325 - -
Vra4g0610 342 PANTHER PROTEIN RETICULATA-RELATED 3, CHLOROPLASTIC-LIKE 55 325 - -
Vra4g0610 342 MobiDBLite consensus disorder prediction 319 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0610 Vra-Chr4 11526854 11528701 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0610 - - gmx:100815884 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0610 4 11526854 11528701 Vra9g0648 9 7441921 7443343 PCT