Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0553 ATGGAAAAAACAGTTCATATAGCTGTTGTTTCTTGTCCTGGTTTCAGCCACCTTGTCCCTATAGTTGAGTTCACTAAGCGACTTGTCAAACTTCATCCAAATTTTCATGTTACCTGCATCGTTCCCTCACTTGGGTCAACACCAGAATCCTCCATAGCTTACCTTAAAACTCTTCCTTCAAACATTGACTCCATCTTTCTTCCTCCAATCAGCAAAGAACAATTTCTCCAAGGACTACACTTGGGACTCCAAATTCAACTCACAGTTACTCTTTCTCTCCCATCAATACACGAGGTTCTCAGATCCTTGTCATCTAAAGTCCGTTTAACTGCACTTGTGGCTGATGCTTTCGCATTCCAAGTCTTGGAATTTGCAAAGGAGCTCCACTCCTTGTCCTATATTTACTATCCTGGTTCAGCTATGGTATTGTCACTGAACTTACATCTGCCAAAACTTGATGAGGAGGTTTCAGGTGAGTTTAAGGATCTGGCGGAACCTATAAAGTTACCAGGTTGTGTACCACTCTTGGGGGTTGATTTTCCTTCCCTAACCCAAAATCGATCAAGTGAAGCTTACAAGAGTTTGCTTGAACGCGCCAAAGCGATGGTTATAGCTGATGGGATTATCATGAACACCTTTTTAGAAATGGAACCAGGTGCTATAAGAGCATTGGAAGAATCGGTAAATGGGAAGATCAAACTGTACCCTGTGGGACCCTTTACACAGAAAGGGTCAAACAATGAGGATGATGAGTGTTTAAGATGGTTGGACAAGCAGCCAGCTTGTTCAGTGTTGTATGTTTCTTTTGGAAGTGGTGGAACACTGTCTCAACACCAGATCGACGAGCTAGCTTTGGGTTTGGAATTGAGTGGTCAAAGGTTCTTATGGGTTTTGAGAGCACCAAGTAATCTACCTAATTCTGCTTACTTTGAGACTGTTATTATTTTATAA 951 0.4185 MEKTVHIAVVSCPGFSHLVPIVEFTKRLVKLHPNFHVTCIVPSLGSTPESSIAYLKTLPSNIDSIFLPPISKEQFLQGLHLGLQIQLTVTLSLPSIHEVLRSLSSKVRLTALVADAFAFQVLEFAKELHSLSYIYYPGSAMVLSLNLHLPKLDEEVSGEFKDLAEPIKLPGCVPLLGVDFPSLTQNRSSEAYKSLLERAKAMVIADGIIMNTFLEMEPGAIRALEESVNGKIKLYPVGPFTQKGSNNEDDECLRWLDKQPACSVLYVSFGSGGTLSQHQIDELALGLELSGQRFLWVLRAPSNLPNSAYFETVIIL* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0553 316 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 311 - -
Vra4g0553 316 Gene3D Glycogen Phosphorylase B; 1 254 - -
Vra4g0553 316 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 303 - -
Vra4g0553 316 CDD GT1_Gtf-like 6 302 IPR002213 GO:0008194
Vra4g0553 316 Gene3D Glycogen Phosphorylase B; 255 313 - -
Vra4g0553 316 PANTHER GLYCOSYLTRANSFERASE 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0553 Vra-Chr4 10532888 10534159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0553 3 312 Glycosyltransferase AT4G01070 49.206 6.37e-99 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0553 K08237 - gmx:100776274 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra9g0775 9 8943776 8945553 Vra4g0553 4 10532888 10534159 PCT